RNA–Protein interactions for RNA: ENSMUST00000189946.6

Nucks1-203, Transcript of Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nucks1, Length 2,375 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1-203ENSMUST00000189946 NischQ80TM9 1593 aa47.8■■■■■ 5.24
Nucks1-203ENSMUST00000189946 Gm35339A0A140LHH9 1649 aa47.47■■■■■ 5.19
Nucks1-203ENSMUST00000189946 Abcc9P70170 1546 aa46.42■■■■■ 5.02
Nucks1-203ENSMUST00000189946 Abcc8B2RUS7 1588 aa45.62■■■■■ 4.89
Nucks1-203ENSMUST00000189946 Rhox8Q6VSS7 320 aa43.35■■■■■ 4.53
Nucks1-203ENSMUST00000189946 Rtl1Q7M732 1744 aa43.24■■■■■ 4.51
Nucks1-203ENSMUST00000189946 ScribQ80U72 1612 aa42.96■■■■■ 4.47
Nucks1-203ENSMUST00000189946 Ccdc180J3QNE4 1664 aa42.56■■■■■ 4.4
Nucks1-203ENSMUST00000189946 Dcaf1Q80TR8 1506 aa42.42■■■■■ 4.38
Nucks1-203ENSMUST00000189946 Rpgrip1Q9EPQ2 1331 aa42.09■■■■■ 4.33
Nucks1-203ENSMUST00000189946 Kdm5dQ62240 1548 aa41.98■■■■■ 4.31
Nucks1-203ENSMUST00000189946 Rb1cc1Q9ESK9 1588 aa41.85■■■■■ 4.29
Nucks1-203ENSMUST00000189946 NacadQ5SWP3 1504 aa41.74■■■■■ 4.27
Nucks1-203ENSMUST00000189946 Baz1aO88379 1555 aa41.33■■■■■ 4.21
Nucks1-203ENSMUST00000189946 Zcchc6Q5BLK4 1491 aaKnown RBP41.28■■■■■ 4.2
Nucks1-203ENSMUST00000189946 Acin1Q9JIX8 1338 aaKnown RBP40.88■■■■■ 4.13
Nucks1-203ENSMUST00000189946 Sycp2Q9CUU3 1500 aa40.86■■■■■ 4.13
Nucks1-203ENSMUST00000189946 Crybg2B7ZCC2 1516 aa40.7■■■■■ 4.11
Nucks1-203ENSMUST00000189946 Smarca2Q6DIC0 1577 aa40.33■■■■■ 4.05
Nucks1-203ENSMUST00000189946 HrcG5E8J6 738 aa40.32■■■■■ 4.04
Nucks1-203ENSMUST00000189946 Ccdc136Q3TVA9 1136 aa40.28■■■■■ 4.04
Nucks1-203ENSMUST00000189946 BicraF8VPZ9 1578 aa40.05■■■■■ 4
Nucks1-203ENSMUST00000189946 Pcgf6Q99NA9 353 aa39.67■■■■□ 3.94
Nucks1-203ENSMUST00000189946 Ehmt2Q9Z148 1263 aaKnown RBP39.67■■■■□ 3.94
Nucks1-203ENSMUST00000189946 Cecr2E9Q2Z1 1453 aa39.53■■■■□ 3.92
Nucks1-203ENSMUST00000189946 Trim41Q5NCC3 630 aa39.52■■■■□ 3.92
Nucks1-203ENSMUST00000189946 Brd4Q9ESU6 1400 aaKnown RBP39.27■■■■□ 3.88
Nucks1-203ENSMUST00000189946 Synj1Q8CHC4 1574 aa39.08■■■■□ 3.85
Nucks1-203ENSMUST00000189946 Smarca4Q3TKT4 1613 aaKnown RBP38.95■■■■□ 3.83
Nucks1-203ENSMUST00000189946 CftrP26361 1476 aa38.89■■■■□ 3.82
Nucks1-203ENSMUST00000189946 Cep164Q5DU05 1446 aa38.81■■■■□ 3.8
Nucks1-203ENSMUST00000189946 Cttnbp2B9EJA2 1648 aa38.78■■■■□ 3.8
Nucks1-203ENSMUST00000189946 Supt5hO55201 1082 aaKnown RBP38.66■■■■□ 3.78
Nucks1-203ENSMUST00000189946 Cngb1E1AZ71 1325 aa38.64■■■■□ 3.78
Nucks1-203ENSMUST00000189946 Golga3P55937 1487 aa38.62■■■■□ 3.77
Nucks1-203ENSMUST00000189946 Iqgap2Q3UQ44 1575 aa38.5■■■■□ 3.75
Nucks1-203ENSMUST00000189946 Atad2bE9Q166 1460 aaKnown RBP38.47■■■■□ 3.75
Nucks1-203ENSMUST00000189946 Esf1Q3V1V3 845 aaKnown RBP38.46■■■■□ 3.75
Nucks1-203ENSMUST00000189946 Pds5bQ4VA53 1446 aaKnown RBP38.42■■■■□ 3.74
Nucks1-203ENSMUST00000189946 Top2bQ64511 1612 aa38.33■■■■□ 3.73
Nucks1-203ENSMUST00000189946 Rsf1E9PWW9 1441 aaKnown RBP38.31■■■■□ 3.72
Nucks1-203ENSMUST00000189946 Chic1Q8CBW7 227 aa38.2■■■■□ 3.71
Nucks1-203ENSMUST00000189946 Ccdc88bQ4QRL3 1481 aa38.19■■■■□ 3.7
Nucks1-203ENSMUST00000189946 Neurod1Q60867 357 aa38.13■■■■□ 3.69
Nucks1-203ENSMUST00000189946 Cc2d2aQ8CFW7 1633 aa38.01■■■■□ 3.67
Nucks1-203ENSMUST00000189946 NefmP08553 848 aa37.95■■■■□ 3.67
Nucks1-203ENSMUST00000189946 Wdr62Q3U3T8 1523 aa37.85■■■■□ 3.65
Nucks1-203ENSMUST00000189946 Frmpd1A2AKB4 1549 aa37.82■■■■□ 3.64
Nucks1-203ENSMUST00000189946 Fmn1Q05860 1466 aa37.76■■■■□ 3.64
Nucks1-203ENSMUST00000189946 Ercc6F8VPZ5 1481 aa37.75■■■■□ 3.63
Nucks1-203ENSMUST00000189946 Gab3Q8BSM5 595 aa37.71■■■■□ 3.63
Nucks1-203ENSMUST00000189946 Las1lA2BE28 776 aaKnown RBP37.7■■■■□ 3.63
Nucks1-203ENSMUST00000189946 Zeb1Q64318 1117 aa37.64■■■■□ 3.62
Nucks1-203ENSMUST00000189946 Mier1Q5UAK0 511 aa37.59■■■■□ 3.61
Nucks1-203ENSMUST00000189946 Top2aQ01320 1528 aaKnown RBP37.47■■■■□ 3.59
Nucks1-203ENSMUST00000189946 Unc13aQ4KUS2 1712 aa37.46■■■■□ 3.59
Nucks1-203ENSMUST00000189946 Sall2Q9QX96 1004 aa37.46■■■■□ 3.59
Nucks1-203ENSMUST00000189946 Thoc2B1AZI6 1594 aaKnown RBP37.45■■■■□ 3.59
Nucks1-203ENSMUST00000189946 TnnQ80Z71 1560 aa37.44■■■■□ 3.58
Nucks1-203ENSMUST00000189946 Anks4bQ8K3X6 423 aa37.33■■■■□ 3.57
Nucks1-203ENSMUST00000189946 Lamc3Q9R0B6 1581 aa37.28■■■■□ 3.56
Nucks1-203ENSMUST00000189946 Kif15Q6P9L6 1387 aa37.15■■■■□ 3.54
Nucks1-203ENSMUST00000189946 Rapgef2Q8CHG7 1496 aa37.14■■■■□ 3.54
Nucks1-203ENSMUST00000189946 Phldb1Q6PDH0 1371 aaKnown RBP37.1■■■■□ 3.53
Nucks1-203ENSMUST00000189946 1700123L14RikQ3V2K7 440 aa37.02■■■■□ 3.52
Nucks1-203ENSMUST00000189946 Fam135aQ6NS59 1506 aa36.95■■■■□ 3.51
Nucks1-203ENSMUST00000189946 Camsap1A2AHC3 1581 aa36.89■■■■□ 3.5
Nucks1-203ENSMUST00000189946 Cep162Q6ZQ06 1403 aa36.84■■■■□ 3.49
Nucks1-203ENSMUST00000189946 Csrnp3P59055 597 aa36.82■■■■□ 3.48
Nucks1-203ENSMUST00000189946 Il27Q8K3I6 234 aa36.8■■■■□ 3.48
Nucks1-203ENSMUST00000189946 Ubl4bQ9CQ84 188 aa36.78■■■■□ 3.48
Nucks1-203ENSMUST00000189946 Npm2Q80W85 207 aa36.76■■■■□ 3.47
Nucks1-203ENSMUST00000189946 Ccdc18Q640L5 1455 aa36.73■■■■□ 3.47
Nucks1-203ENSMUST00000189946 Eif4g1Q6NZJ6 1600 aaKnown RBP36.69■■■■□ 3.46
Nucks1-203ENSMUST00000189946 ClspnQ80YR7 1315 aa36.69■■■■□ 3.46
Nucks1-203ENSMUST00000189946 Aebp2Q9Z248 504 aaKnown RBP36.69■■■■□ 3.46
Nucks1-203ENSMUST00000189946 Cux2P70298 1426 aa36.68■■■■□ 3.46
Nucks1-203ENSMUST00000189946 PtprkP35822 1457 aa36.64■■■■□ 3.46
Nucks1-203ENSMUST00000189946 Aplp2Q06335 707 aa36.62■■■■□ 3.45
Nucks1-203ENSMUST00000189946 Cdk11bP24788 784 aaKnown RBP36.62■■■■□ 3.45
Nucks1-203ENSMUST00000189946 Wdr66E9Q743 1299 aa36.58■■■■□ 3.45
Nucks1-203ENSMUST00000189946 Myt1lP97500 1187 aa36.58■■■■□ 3.45
Nucks1-203ENSMUST00000189946 NrkQ9R0G8 1455 aa36.56■■■■□ 3.44
Nucks1-203ENSMUST00000189946 Grin2bQ01097 1482 aa36.55■■■■□ 3.44
Nucks1-203ENSMUST00000189946 Shroom4Q1W617 1475 aa36.55■■■■□ 3.44
Nucks1-203ENSMUST00000189946 Myt1Q8CFC2 1127 aa36.53■■■■□ 3.44
Nucks1-203ENSMUST00000189946 Nop58Q6DFW4 536 aaKnown RBP36.52■■■■□ 3.44
Nucks1-203ENSMUST00000189946 UbtfP25976 765 aaKnown RBP36.51■■■■□ 3.43
Nucks1-203ENSMUST00000189946 Arhgap35Q91YM2 1499 aa36.46■■■■□ 3.43
Nucks1-203ENSMUST00000189946 Npm1Q61937 292 aaKnown RBP36.42■■■■□ 3.42
Nucks1-203ENSMUST00000189946 Dnajc5bQ9CQ94 199 aa36.34■■■■□ 3.41
Nucks1-203ENSMUST00000189946 CenpbP27790 599 aa36.29■■■■□ 3.4
Nucks1-203ENSMUST00000189946 Baz1bQ9Z277 1479 aa36.27■■■■□ 3.4
Nucks1-203ENSMUST00000189946 LrpprcQ6PB66 1392 aaKnown RBP36.26■■■■□ 3.4
Nucks1-203ENSMUST00000189946 Map3k1P53349 1493 aa36.23■■■■□ 3.39
Nucks1-203ENSMUST00000189946 TonslQ6NZL6 1363 aa36.21■■■■□ 3.39
Nucks1-203ENSMUST00000189946 PogzQ8BZH4 1409 aaKnown RBP36.2■■■■□ 3.39
Nucks1-203ENSMUST00000189946 Mrc2Q64449 1479 aa36.15■■■■□ 3.38
Nucks1-203ENSMUST00000189946 Mroh2bQ7M6Y6 1581 aa36.14■■■■□ 3.38
Nucks1-203ENSMUST00000189946 Efcab5A0JP43 1406 aa36.13■■■■□ 3.37
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms