Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm25239-201ENSMUST00000174915 86 ntBASIC34.63■■■■□ 3.13
Cuedc1Q8R3V6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Cuedc1Q8R3V6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cuedc1Q8R3V6 Gm24109-201ENSMUST00000175489 103 ntBASIC30.19■■■□□ 2.42
Cuedc1Q8R3V6 Gm15042-201ENSMUST00000120212 883 ntBASIC29.91■■■□□ 2.38
Cuedc1Q8R3V6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Cuedc1Q8R3V6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cuedc1Q8R3V6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cuedc1Q8R3V6 Gm15045-201ENSMUST00000117359 883 ntBASIC29.13■■■□□ 2.25
Cuedc1Q8R3V6 Gm23366-201ENSMUST00000175022 89 ntBASIC28.95■■■□□ 2.22
Cuedc1Q8R3V6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cuedc1Q8R3V6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cuedc1Q8R3V6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.28■■■□□ 2.12
Cuedc1Q8R3V6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
Cuedc1Q8R3V6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Cuedc1Q8R3V6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Cuedc1Q8R3V6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Cuedc1Q8R3V6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.95■■■□□ 2.06
Cuedc1Q8R3V6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Cuedc1Q8R3V6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Cuedc1Q8R3V6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Cuedc1Q8R3V6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.6■■■□□ 2.01
Cuedc1Q8R3V6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cuedc1Q8R3V6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cuedc1Q8R3V6 Gm25238-201ENSMUST00000174914 89 ntBASIC27.44■■□□□ 1.98
Cuedc1Q8R3V6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cuedc1Q8R3V6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
Cuedc1Q8R3V6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Cuedc1Q8R3V6 Psd-208ENSMUST00000224556 2034 ntBASIC26.88■■□□□ 1.89
Cuedc1Q8R3V6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Cuedc1Q8R3V6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cuedc1Q8R3V6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
Cuedc1Q8R3V6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cuedc1Q8R3V6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cuedc1Q8R3V6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.67■■□□□ 1.86
Cuedc1Q8R3V6 Gm25262-201ENSMUST00000174934 133 ntBASIC26.59■■□□□ 1.85
Cuedc1Q8R3V6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.59■■□□□ 1.85
Cuedc1Q8R3V6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.57■■□□□ 1.84
Cuedc1Q8R3V6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cuedc1Q8R3V6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cuedc1Q8R3V6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cuedc1Q8R3V6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cuedc1Q8R3V6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.33■■□□□ 1.81
Cuedc1Q8R3V6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cuedc1Q8R3V6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.29■■□□□ 1.8
Cuedc1Q8R3V6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.23■■□□□ 1.79
Cuedc1Q8R3V6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cuedc1Q8R3V6 Gm27325-201ENSMUST00000175467 74 ntBASIC26.14■■□□□ 1.78
Cuedc1Q8R3V6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.12■■□□□ 1.77
Cuedc1Q8R3V6 Gm26115-201ENSMUST00000175605 87 ntBASIC26.1■■□□□ 1.77
Cuedc1Q8R3V6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cuedc1Q8R3V6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.02■■□□□ 1.76
Cuedc1Q8R3V6 Rab21-202ENSMUST00000218831 843 ntBASIC25.97■■□□□ 1.75
Cuedc1Q8R3V6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.94■■□□□ 1.74
Cuedc1Q8R3V6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Cuedc1Q8R3V6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Cuedc1Q8R3V6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cuedc1Q8R3V6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cuedc1Q8R3V6 Gm8109-201ENSMUST00000194076 746 ntBASIC25.81■■□□□ 1.72
Cuedc1Q8R3V6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cuedc1Q8R3V6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cuedc1Q8R3V6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cuedc1Q8R3V6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cuedc1Q8R3V6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cuedc1Q8R3V6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cuedc1Q8R3V6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Cuedc1Q8R3V6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.57■■□□□ 1.68
Cuedc1Q8R3V6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Cuedc1Q8R3V6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.5■■□□□ 1.67
Cuedc1Q8R3V6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.47■■□□□ 1.67
Cuedc1Q8R3V6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.46■■□□□ 1.67
Cuedc1Q8R3V6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cuedc1Q8R3V6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cuedc1Q8R3V6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cuedc1Q8R3V6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cuedc1Q8R3V6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cuedc1Q8R3V6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cuedc1Q8R3V6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cuedc1Q8R3V6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.2■■□□□ 1.63
Cuedc1Q8R3V6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cuedc1Q8R3V6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.19■■□□□ 1.62
Cuedc1Q8R3V6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.16■■□□□ 1.62
Cuedc1Q8R3V6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cuedc1Q8R3V6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cuedc1Q8R3V6 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.1■■□□□ 1.61
Cuedc1Q8R3V6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cuedc1Q8R3V6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cuedc1Q8R3V6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cuedc1Q8R3V6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cuedc1Q8R3V6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cuedc1Q8R3V6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cuedc1Q8R3V6 Gm24804-201ENSMUST00000174982 85 ntBASIC24.97■■□□□ 1.59
Cuedc1Q8R3V6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cuedc1Q8R3V6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
Cuedc1Q8R3V6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cuedc1Q8R3V6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
Cuedc1Q8R3V6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.9■■□□□ 1.58
Cuedc1Q8R3V6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Cuedc1Q8R3V6 Gm27322-201ENSMUST00000184007 104 ntBASIC24.87■■□□□ 1.57
Cuedc1Q8R3V6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms