Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm25239-201ENSMUST00000174915 86 ntBASIC34,63■■■■□ 3,13
Cuedc1Q8R3V6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,2■■■□□ 2,75
Cuedc1Q8R3V6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Cuedc1Q8R3V6 Gm24109-201ENSMUST00000175489 103 ntBASIC30,19■■■□□ 2,42
Cuedc1Q8R3V6 Gm15042-201ENSMUST00000120212 883 ntBASIC29,91■■■□□ 2,38
Cuedc1Q8R3V6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,39■■■□□ 2,3
Cuedc1Q8R3V6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,3■■■□□ 2,28
Cuedc1Q8R3V6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Cuedc1Q8R3V6 Gm15045-201ENSMUST00000117359 883 ntBASIC29,13■■■□□ 2,25
Cuedc1Q8R3V6 Gm23366-201ENSMUST00000175022 89 ntBASIC28,95■■■□□ 2,22
Cuedc1Q8R3V6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,9■■■□□ 2,22
Cuedc1Q8R3V6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Cuedc1Q8R3V6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,28■■■□□ 2,12
Cuedc1Q8R3V6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,09■■■□□ 2,09
Cuedc1Q8R3V6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,05■■■□□ 2,08
Cuedc1Q8R3V6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Cuedc1Q8R3V6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
Cuedc1Q8R3V6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27,95■■■□□ 2,06
Cuedc1Q8R3V6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,06
Cuedc1Q8R3V6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,85■■■□□ 2,05
Cuedc1Q8R3V6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,74■■■□□ 2,03
Cuedc1Q8R3V6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,6■■■□□ 2,01
Cuedc1Q8R3V6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,58■■■□□ 2,01
Cuedc1Q8R3V6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
Cuedc1Q8R3V6 Gm25238-201ENSMUST00000174914 89 ntBASIC27,44■■□□□ 1,98
Cuedc1Q8R3V6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Cuedc1Q8R3V6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,03■■□□□ 1,92
Cuedc1Q8R3V6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1,91
Cuedc1Q8R3V6 Psd-208ENSMUST00000224556 2034 ntBASIC26,88■■□□□ 1,89
Cuedc1Q8R3V6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26,87■■□□□ 1,89
Cuedc1Q8R3V6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,83■■□□□ 1,89
Cuedc1Q8R3V6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,83■■□□□ 1,89
Cuedc1Q8R3V6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Cuedc1Q8R3V6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Cuedc1Q8R3V6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,67■■□□□ 1,86
Cuedc1Q8R3V6 Gm25262-201ENSMUST00000174934 133 ntBASIC26,59■■□□□ 1,85
Cuedc1Q8R3V6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,59■■□□□ 1,85
Cuedc1Q8R3V6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,57■■□□□ 1,84
Cuedc1Q8R3V6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Cuedc1Q8R3V6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Cuedc1Q8R3V6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,4■■□□□ 1,82
Cuedc1Q8R3V6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,37■■□□□ 1,81
Cuedc1Q8R3V6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,33■■□□□ 1,81
Cuedc1Q8R3V6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,3■■□□□ 1,8
Cuedc1Q8R3V6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,29■■□□□ 1,8
Cuedc1Q8R3V6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,23■■□□□ 1,79
Cuedc1Q8R3V6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,17■■□□□ 1,78
Cuedc1Q8R3V6 Gm27325-201ENSMUST00000175467 74 ntBASIC26,14■■□□□ 1,78
Cuedc1Q8R3V6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,12■■□□□ 1,77
Cuedc1Q8R3V6 Gm26115-201ENSMUST00000175605 87 ntBASIC26,1■■□□□ 1,77
Cuedc1Q8R3V6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Cuedc1Q8R3V6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,02■■□□□ 1,76
Cuedc1Q8R3V6 Rab21-202ENSMUST00000218831 843 ntBASIC25,97■■□□□ 1,75
Cuedc1Q8R3V6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25,94■■□□□ 1,74
Cuedc1Q8R3V6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,93■■□□□ 1,74
Cuedc1Q8R3V6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,91■■□□□ 1,74
Cuedc1Q8R3V6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Cuedc1Q8R3V6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Cuedc1Q8R3V6 Gm8109-201ENSMUST00000194076 746 ntBASIC25,81■■□□□ 1,72
Cuedc1Q8R3V6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Cuedc1Q8R3V6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Cuedc1Q8R3V6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,77■■□□□ 1,72
Cuedc1Q8R3V6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Cuedc1Q8R3V6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Cuedc1Q8R3V6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Cuedc1Q8R3V6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Cuedc1Q8R3V6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,57■■□□□ 1,68
Cuedc1Q8R3V6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25,53■■□□□ 1,68
Cuedc1Q8R3V6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,5■■□□□ 1,67
Cuedc1Q8R3V6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25,47■■□□□ 1,67
Cuedc1Q8R3V6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,46■■□□□ 1,67
Cuedc1Q8R3V6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,33■■□□□ 1,65
Cuedc1Q8R3V6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Cuedc1Q8R3V6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Cuedc1Q8R3V6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Cuedc1Q8R3V6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,29■■□□□ 1,64
Cuedc1Q8R3V6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,23■■□□□ 1,63
Cuedc1Q8R3V6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Cuedc1Q8R3V6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,2■■□□□ 1,63
Cuedc1Q8R3V6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Cuedc1Q8R3V6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25,19■■□□□ 1,62
Cuedc1Q8R3V6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,16■■□□□ 1,62
Cuedc1Q8R3V6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,16■■□□□ 1,62
Cuedc1Q8R3V6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Cuedc1Q8R3V6 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,1■■□□□ 1,61
Cuedc1Q8R3V6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Cuedc1Q8R3V6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,09■■□□□ 1,61
Cuedc1Q8R3V6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,07■■□□□ 1,6
Cuedc1Q8R3V6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Cuedc1Q8R3V6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Cuedc1Q8R3V6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,04■■□□□ 1,6
Cuedc1Q8R3V6 Gm24804-201ENSMUST00000174982 85 ntBASIC24,97■■□□□ 1,59
Cuedc1Q8R3V6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,96■■□□□ 1,59
Cuedc1Q8R3V6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,95■■□□□ 1,58
Cuedc1Q8R3V6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Cuedc1Q8R3V6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,91■■□□□ 1,58
Cuedc1Q8R3V6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24,9■■□□□ 1,58
Cuedc1Q8R3V6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24,87■■□□□ 1,57
Cuedc1Q8R3V6 Gm27322-201ENSMUST00000184007 104 ntBASIC24,87■■□□□ 1,57
Cuedc1Q8R3V6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24,83■■□□□ 1,57
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms