Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.38■■■□□ 2.93
RTL9Q8NET4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
RTL9Q8NET4 ZNRF2P2-203ENST00000454624 420 ntBASIC33.37■■■□□ 2.93
RTL9Q8NET4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.36■■■□□ 2.93
RTL9Q8NET4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
RTL9Q8NET4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC33.35■■■□□ 2.93
RTL9Q8NET4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
RTL9Q8NET4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.34■■■□□ 2.93
RTL9Q8NET4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
RTL9Q8NET4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC33.32■■■□□ 2.92
RTL9Q8NET4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.32■■■□□ 2.92
RTL9Q8NET4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
RTL9Q8NET4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
RTL9Q8NET4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC33.3■■■□□ 2.92
RTL9Q8NET4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
RTL9Q8NET4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RTL9Q8NET4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC33.29■■■□□ 2.92
RTL9Q8NET4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.29■■■□□ 2.92
RTL9Q8NET4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RTL9Q8NET4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
RTL9Q8NET4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RTL9Q8NET4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.28■■■□□ 2.92
RTL9Q8NET4 AC108673.1-201ENST00000510422 1159 ntBASIC33.25■■■□□ 2.91
RTL9Q8NET4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
RTL9Q8NET4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.25■■■□□ 2.91
RTL9Q8NET4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
RTL9Q8NET4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.24■■■□□ 2.91
RTL9Q8NET4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
RTL9Q8NET4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
RTL9Q8NET4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RTL9Q8NET4 MIR6090-201ENST00000622481 60 ntBASIC33.23■■■□□ 2.91
RTL9Q8NET4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33.22■■■□□ 2.91
RTL9Q8NET4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
RTL9Q8NET4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
RTL9Q8NET4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
RTL9Q8NET4 DUX4L29-201ENST00000425409 679 ntBASIC33.21■■■□□ 2.91
RTL9Q8NET4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RTL9Q8NET4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC33.21■■■□□ 2.91
RTL9Q8NET4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.2■■■□□ 2.91
RTL9Q8NET4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.9
RTL9Q8NET4 AC021231.2-201ENST00000594613 730 ntBASIC33.19■■■□□ 2.9
RTL9Q8NET4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
RTL9Q8NET4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
RTL9Q8NET4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RTL9Q8NET4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
RTL9Q8NET4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RTL9Q8NET4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.15■■■□□ 2.9
RTL9Q8NET4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTL9Q8NET4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTL9Q8NET4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTL9Q8NET4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC33.13■■■□□ 2.89
RTL9Q8NET4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.13■■■□□ 2.89
RTL9Q8NET4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
RTL9Q8NET4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RTL9Q8NET4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
RTL9Q8NET4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
RTL9Q8NET4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC33.11■■■□□ 2.89
RTL9Q8NET4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RTL9Q8NET4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
RTL9Q8NET4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.1■■■□□ 2.89
RTL9Q8NET4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RTL9Q8NET4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RTL9Q8NET4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
RTL9Q8NET4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC33.08■■■□□ 2.89
RTL9Q8NET4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.08■■■□□ 2.89
RTL9Q8NET4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.07■■■□□ 2.88
RTL9Q8NET4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
RTL9Q8NET4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.06■■■□□ 2.88
RTL9Q8NET4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
RTL9Q8NET4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RTL9Q8NET4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RTL9Q8NET4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC33.03■■■□□ 2.88
RTL9Q8NET4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC33.01■■■□□ 2.88
RTL9Q8NET4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
RTL9Q8NET4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
RTL9Q8NET4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
RTL9Q8NET4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RTL9Q8NET4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RTL9Q8NET4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
RTL9Q8NET4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.97■■■□□ 2.87
RTL9Q8NET4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
RTL9Q8NET4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RTL9Q8NET4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
RTL9Q8NET4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.96■■■□□ 2.87
RTL9Q8NET4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.96■■■□□ 2.87
RTL9Q8NET4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.96■■■□□ 2.87
RTL9Q8NET4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
RTL9Q8NET4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RTL9Q8NET4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
RTL9Q8NET4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.86
RTL9Q8NET4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
RTL9Q8NET4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RTL9Q8NET4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.93■■■□□ 2.86
RTL9Q8NET4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.93■■■□□ 2.86
RTL9Q8NET4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RTL9Q8NET4 MIR4449-201ENST00000578365 66 ntBASIC32.92■■■□□ 2.86
RTL9Q8NET4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RTL9Q8NET4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RTL9Q8NET4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RTL9Q8NET4 AL161658.1-201ENST00000623641 1967 ntBASIC32.9■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms