Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC39.3■■■■□ 3.88
UBR1Q8IWV7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC39.29■■■■□ 3.88
UBR1Q8IWV7 DUX4L11-201ENST00000611504 1267 ntBASIC39.28■■■■□ 3.88
UBR1Q8IWV7 DUX4L12-201ENST00000614593 1267 ntBASIC39.28■■■■□ 3.88
UBR1Q8IWV7 DUX4L14-201ENST00000621227 1267 ntBASIC39.28■■■■□ 3.88
UBR1Q8IWV7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC39.28■■■■□ 3.88
UBR1Q8IWV7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC39.28■■■■□ 3.88
UBR1Q8IWV7 LINC01971-201ENST00000617888 1048 ntBASIC39.28■■■■□ 3.88
UBR1Q8IWV7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
UBR1Q8IWV7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
UBR1Q8IWV7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC39.19■■■■□ 3.86
UBR1Q8IWV7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
UBR1Q8IWV7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
UBR1Q8IWV7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC39.16■■■■□ 3.86
UBR1Q8IWV7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC39.16■■■■□ 3.86
UBR1Q8IWV7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
UBR1Q8IWV7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
UBR1Q8IWV7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC39.15■■■■□ 3.86
UBR1Q8IWV7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
UBR1Q8IWV7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
UBR1Q8IWV7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
UBR1Q8IWV7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
UBR1Q8IWV7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
UBR1Q8IWV7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
UBR1Q8IWV7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC39.12■■■■□ 3.85
UBR1Q8IWV7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC39.12■■■■□ 3.85
UBR1Q8IWV7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
UBR1Q8IWV7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC39.11■■■■□ 3.85
UBR1Q8IWV7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
UBR1Q8IWV7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
UBR1Q8IWV7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC39.1■■■■□ 3.85
UBR1Q8IWV7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
UBR1Q8IWV7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC39.09■■■■□ 3.85
UBR1Q8IWV7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC39.09■■■■□ 3.85
UBR1Q8IWV7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC39.09■■■■□ 3.85
UBR1Q8IWV7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC39.08■■■■□ 3.85
UBR1Q8IWV7 ABHD17AP3-201ENST00000503096 1137 ntBASIC39.08■■■■□ 3.85
UBR1Q8IWV7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC39.08■■■■□ 3.85
UBR1Q8IWV7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
UBR1Q8IWV7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
UBR1Q8IWV7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
UBR1Q8IWV7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
UBR1Q8IWV7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
UBR1Q8IWV7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC39■■■■□ 3.83
UBR1Q8IWV7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC38.99■■■■□ 3.83
UBR1Q8IWV7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC38.98■■■■□ 3.83
UBR1Q8IWV7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
UBR1Q8IWV7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
UBR1Q8IWV7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
UBR1Q8IWV7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
UBR1Q8IWV7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
UBR1Q8IWV7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC38.97■■■■□ 3.83
UBR1Q8IWV7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
UBR1Q8IWV7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
UBR1Q8IWV7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC38.94■■■■□ 3.82
UBR1Q8IWV7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.93■■■■□ 3.82
UBR1Q8IWV7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC38.92■■■■□ 3.82
UBR1Q8IWV7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
UBR1Q8IWV7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
UBR1Q8IWV7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC38.91■■■■□ 3.82
UBR1Q8IWV7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC38.91■■■■□ 3.82
UBR1Q8IWV7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC38.9■■■■□ 3.82
UBR1Q8IWV7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.9■■■■□ 3.82
UBR1Q8IWV7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC38.89■■■■□ 3.82
UBR1Q8IWV7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC38.89■■■■□ 3.82
UBR1Q8IWV7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
UBR1Q8IWV7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC38.88■■■■□ 3.81
UBR1Q8IWV7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC38.87■■■■□ 3.81
UBR1Q8IWV7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC38.87■■■■□ 3.81
UBR1Q8IWV7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC38.87■■■■□ 3.81
UBR1Q8IWV7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.86■■■■□ 3.81
UBR1Q8IWV7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
UBR1Q8IWV7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC38.86■■■■□ 3.81
UBR1Q8IWV7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC38.86■■■■□ 3.81
UBR1Q8IWV7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC38.86■■■■□ 3.81
UBR1Q8IWV7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
UBR1Q8IWV7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
UBR1Q8IWV7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
UBR1Q8IWV7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L13-201ENST00000554103 1267 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L15-201ENST00000611059 1267 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L23-201ENST00000615195 1269 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L24-201ENST00000617576 1269 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L22-201ENST00000618238 1269 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L20-201ENST00000619712 1269 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L21-201ENST00000622058 1269 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L10-201ENST00000622460 1267 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 DUX4L25-201ENST00000624915 1269 ntBASIC38.83■■■■□ 3.81
UBR1Q8IWV7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
UBR1Q8IWV7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
UBR1Q8IWV7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC38.8■■■■□ 3.8
UBR1Q8IWV7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC38.78■■■■□ 3.8
UBR1Q8IWV7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC38.77■■■■□ 3.8
UBR1Q8IWV7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC38.77■■■■□ 3.8
UBR1Q8IWV7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC38.77■■■■□ 3.8
UBR1Q8IWV7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
UBR1Q8IWV7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
UBR1Q8IWV7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
UBR1Q8IWV7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
UBR1Q8IWV7 RARRES2P2-201ENST00000394842 485 ntBASIC38.71■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms