Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.77■□□□□ 0.92
NDUFA11Q86Y39 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.77■□□□□ 0.92
NDUFA11Q86Y39 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
NDUFA11Q86Y39 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NDUFA11Q86Y39 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 AC021231.2-201ENST00000594613 730 ntBASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA11Q86Y39 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFA11Q86Y39 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFA11Q86Y39 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFA11Q86Y39 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFA11Q86Y39 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
NDUFA11Q86Y39 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA11Q86Y39 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NDUFA11Q86Y39 MIR6090-201ENST00000622481 60 ntBASIC20.7■□□□□ 0.9
NDUFA11Q86Y39 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA11Q86Y39 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFA11Q86Y39 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFA11Q86Y39 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFA11Q86Y39 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA11Q86Y39 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
NDUFA11Q86Y39 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA11Q86Y39 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA11Q86Y39 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFA11Q86Y39 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 LINC01971-201ENST00000617888 1048 ntBASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA11Q86Y39 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NDUFA11Q86Y39 MIR639-201ENST00000384974 98 ntBASIC20.59■□□□□ 0.89
NDUFA11Q86Y39 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFA11Q86Y39 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.58■□□□□ 0.89
NDUFA11Q86Y39 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFA11Q86Y39 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFA11Q86Y39 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 AC120057.4-201ENST00000624722 1615 ntBASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 MIR4449-201ENST00000578365 66 ntBASIC20.57■□□□□ 0.88
NDUFA11Q86Y39 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NDUFA11Q86Y39 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFA11Q86Y39 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.56■□□□□ 0.88
NDUFA11Q86Y39 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 MIR3648-2-201ENST00000581792 180 ntBASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 MIR3648-1-201ENST00000615959 180 ntBASIC20.55■□□□□ 0.88
NDUFA11Q86Y39 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DUX4L11-201ENST00000611504 1267 ntBASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DUX4L12-201ENST00000614593 1267 ntBASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DUX4L14-201ENST00000621227 1267 ntBASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA11Q86Y39 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NDUFA11Q86Y39 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFA11Q86Y39 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.52■□□□□ 0.88
NDUFA11Q86Y39 AC016575.1-201ENST00000607026 382 ntBASIC20.52■□□□□ 0.88
NDUFA11Q86Y39 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NDUFA11Q86Y39 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA11Q86Y39 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms