Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.05■□□□□ 0.96
SHISA2Q6UWI4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHISA2Q6UWI4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHISA2Q6UWI4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHISA2Q6UWI4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.04■□□□□ 0.96
SHISA2Q6UWI4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.03■□□□□ 0.96
SHISA2Q6UWI4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHISA2Q6UWI4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SHISA2Q6UWI4 MIR6090-201ENST00000622481 60 ntBASIC21.01■□□□□ 0.95
SHISA2Q6UWI4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHISA2Q6UWI4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHISA2Q6UWI4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHISA2Q6UWI4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SHISA2Q6UWI4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21■□□□□ 0.95
SHISA2Q6UWI4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA2Q6UWI4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA2Q6UWI4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.99■□□□□ 0.95
SHISA2Q6UWI4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SHISA2Q6UWI4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHISA2Q6UWI4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.98■□□□□ 0.95
SHISA2Q6UWI4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHISA2Q6UWI4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHISA2Q6UWI4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA2Q6UWI4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.97■□□□□ 0.95
SHISA2Q6UWI4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHISA2Q6UWI4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHISA2Q6UWI4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA2Q6UWI4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.95■□□□□ 0.94
SHISA2Q6UWI4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA2Q6UWI4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.93■□□□□ 0.94
SHISA2Q6UWI4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.93■□□□□ 0.94
SHISA2Q6UWI4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA2Q6UWI4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHISA2Q6UWI4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.9■□□□□ 0.94
SHISA2Q6UWI4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA2Q6UWI4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA2Q6UWI4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA2Q6UWI4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHISA2Q6UWI4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.89■□□□□ 0.93
SHISA2Q6UWI4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHISA2Q6UWI4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
SHISA2Q6UWI4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA2Q6UWI4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SHISA2Q6UWI4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHISA2Q6UWI4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHISA2Q6UWI4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHISA2Q6UWI4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHISA2Q6UWI4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHISA2Q6UWI4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHISA2Q6UWI4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHISA2Q6UWI4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.85■□□□□ 0.93
SHISA2Q6UWI4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.85■□□□□ 0.93
SHISA2Q6UWI4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.85■□□□□ 0.93
SHISA2Q6UWI4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SHISA2Q6UWI4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHISA2Q6UWI4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.84■□□□□ 0.93
SHISA2Q6UWI4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L13-201ENST00000554103 1267 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L15-201ENST00000611059 1267 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L23-201ENST00000615195 1269 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L24-201ENST00000617576 1269 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L22-201ENST00000618238 1269 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L20-201ENST00000619712 1269 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L21-201ENST00000622058 1269 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L10-201ENST00000622460 1267 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DUX4L25-201ENST00000624915 1269 ntBASIC20.83■□□□□ 0.93
SHISA2Q6UWI4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHISA2Q6UWI4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHISA2Q6UWI4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.82■□□□□ 0.92
SHISA2Q6UWI4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SHISA2Q6UWI4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.81■□□□□ 0.92
SHISA2Q6UWI4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHISA2Q6UWI4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHISA2Q6UWI4 ABHD17AP5-201ENST00000580133 923 ntBASIC20.8■□□□□ 0.92
SHISA2Q6UWI4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHISA2Q6UWI4 RARRES2P2-201ENST00000394842 485 ntBASIC20.79■□□□□ 0.92
SHISA2Q6UWI4 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.79■□□□□ 0.92
SHISA2Q6UWI4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA2Q6UWI4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHISA2Q6UWI4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHISA2Q6UWI4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.77■□□□□ 0.92
SHISA2Q6UWI4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.76■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA2Q6UWI4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.74■□□□□ 0.91
SHISA2Q6UWI4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA2Q6UWI4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA2Q6UWI4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.73■□□□□ 0.91
SHISA2Q6UWI4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA2Q6UWI4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms