Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.51■■■□□ 2.79
PDS5AQ29RF7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.51■■■□□ 2.79
PDS5AQ29RF7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PDS5AQ29RF7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PDS5AQ29RF7 ABHD17AP4-201ENST00000411545 909 ntBASIC32.46■■■□□ 2.79
PDS5AQ29RF7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PDS5AQ29RF7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
PDS5AQ29RF7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.43■■■□□ 2.78
PDS5AQ29RF7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
PDS5AQ29RF7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PDS5AQ29RF7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PDS5AQ29RF7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PDS5AQ29RF7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.39■■■□□ 2.78
PDS5AQ29RF7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PDS5AQ29RF7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.38■■■□□ 2.77
PDS5AQ29RF7 AC108673.1-201ENST00000510422 1159 ntBASIC32.37■■■□□ 2.77
PDS5AQ29RF7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
PDS5AQ29RF7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PDS5AQ29RF7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PDS5AQ29RF7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PDS5AQ29RF7 MIR6090-201ENST00000622481 60 ntBASIC32.31■■■□□ 2.76
PDS5AQ29RF7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.31■■■□□ 2.76
PDS5AQ29RF7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PDS5AQ29RF7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PDS5AQ29RF7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
PDS5AQ29RF7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.27■■■□□ 2.76
PDS5AQ29RF7 MIR7108-201ENST00000614319 87 ntBASIC32.27■■■□□ 2.76
PDS5AQ29RF7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PDS5AQ29RF7 DUX4L29-201ENST00000425409 679 ntBASIC32.26■■■□□ 2.75
PDS5AQ29RF7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.24■■■□□ 2.75
PDS5AQ29RF7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
PDS5AQ29RF7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
PDS5AQ29RF7 AL161658.1-201ENST00000623641 1967 ntBASIC32.23■■■□□ 2.75
PDS5AQ29RF7 ZNRF2P2-203ENST00000454624 420 ntBASIC32.23■■■□□ 2.75
PDS5AQ29RF7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.23■■■□□ 2.75
PDS5AQ29RF7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PDS5AQ29RF7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
PDS5AQ29RF7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PDS5AQ29RF7 AC021231.2-201ENST00000594613 730 ntBASIC32.21■■■□□ 2.75
PDS5AQ29RF7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PDS5AQ29RF7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
PDS5AQ29RF7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.2■■■□□ 2.74
PDS5AQ29RF7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.16■■■□□ 2.74
PDS5AQ29RF7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PDS5AQ29RF7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.15■■■□□ 2.74
PDS5AQ29RF7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.15■■■□□ 2.74
PDS5AQ29RF7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
PDS5AQ29RF7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PDS5AQ29RF7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
PDS5AQ29RF7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.11■■■□□ 2.73
PDS5AQ29RF7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
PDS5AQ29RF7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
PDS5AQ29RF7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PDS5AQ29RF7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PDS5AQ29RF7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.07■■■□□ 2.72
PDS5AQ29RF7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.05■■■□□ 2.72
PDS5AQ29RF7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.05■■■□□ 2.72
PDS5AQ29RF7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PDS5AQ29RF7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PDS5AQ29RF7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PDS5AQ29RF7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms