Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 SNZ1YMR096W 894 nt12.3□□□□□ -0.44
RCM1P53972 TOA2YKL058W 369 nt12.29□□□□□ -0.44
RCM1P53972 SLG1YOR008C 1137 nt12.29□□□□□ -0.44
RCM1P53972 LSB5YCL034W 1065 nt12.28□□□□□ -0.44
RCM1P53972 SSN3YPL042C 1668 nt12.28□□□□□ -0.44
RCM1P53972 IRC24YIR036C 792 nt12.27□□□□□ -0.45
RCM1P53972 TAF13YML098W 504 nt12.25□□□□□ -0.45
RCM1P53972 YMR262WYMR262W 942 nt12.24□□□□□ -0.45
RCM1P53972 BNI5YNL166C 1347 nt12.24□□□□□ -0.45
RCM1P53972 SNF1YDR477W 1902 nt12.23□□□□□ -0.45
RCM1P53972 RPT5YOR117W 1305 nt12.23□□□□□ -0.45
RCM1P53972 GND2YGR256W 1479 nt12.22□□□□□ -0.45
RCM1P53972 PHO23YNL097C 993 nt12.21□□□□□ -0.45
RCM1P53972 TIM44YIL022W 1296 nt12.2□□□□□ -0.46
RCM1P53972 HIF1YLL022C 1158 nt12.2□□□□□ -0.46
RCM1P53972 TRT2tT(CGU)K 72 nt12.19□□□□□ -0.46
RCM1P53972 NUC1YJL208C 990 nt12.19□□□□□ -0.46
RCM1P53972 YJR114WYJR114W 393 nt12.19□□□□□ -0.46
RCM1P53972 RIB7YBR153W 735 nt12.18□□□□□ -0.46
RCM1P53972 UFO1YML088W 2007 nt12.18□□□□□ -0.46
RCM1P53972 MSC1YML128C 1542 nt12.16□□□□□ -0.46
RCM1P53972 Q0182Q0182 405 nt12.16□□□□□ -0.46
RCM1P53972 TIP1YBR067C 633 nt12.16□□□□□ -0.46
RCM1P53972 SHY1YGR112W 1170 nt12.15□□□□□ -0.46
RCM1P53972 YPR126CYPR126C 309 nt12.15□□□□□ -0.46
RCM1P53972 TPS1YBR126C 1488 nt12.13□□□□□ -0.47
RCM1P53972 TUB4YLR212C 1422 nt12.12□□□□□ -0.47
RCM1P53972 APS2YJR058C 444 nt12.12□□□□□ -0.47
RCM1P53972 YJL225CYJL225C 5277 nt12.11□□□□□ -0.47
RCM1P53972 PAR32YDL173W 888 nt12.11□□□□□ -0.47
RCM1P53972 MHF1YOL086W-A 273 nt12.11□□□□□ -0.47
RCM1P53972 POT1YIL160C 1254 nt12.1□□□□□ -0.47
RCM1P53972 CTI6YPL181W 1521 nt12.09□□□□□ -0.47
RCM1P53972 GSF2YML048W 1212 nt12.08□□□□□ -0.48
RCM1P53972 SEC61YLR378C 1443 nt12.06□□□□□ -0.48
RCM1P53972 DAK2YFL053W 1776 nt12.06□□□□□ -0.48
RCM1P53972 FUB1YCR076C 753 nt12.05□□□□□ -0.48
RCM1P53972 OXA1YER154W 1209 nt12.04□□□□□ -0.48
RCM1P53972 NIF3YGL221C 867 nt12.04□□□□□ -0.48
RCM1P53972 OYE2YHR179W 1203 nt12.04□□□□□ -0.48
RCM1P53972 SAM2YDR502C 1155 nt12.03□□□□□ -0.48
RCM1P53972 RIB1YBL033C 1038 nt12.03□□□□□ -0.48
RCM1P53972 RAS2YNL098C 969 nt12.03□□□□□ -0.48
RCM1P53972 OYE3YPL171C 1203 nt12.03□□□□□ -0.48
RCM1P53972 EAF3YPR023C 1206 nt12.03□□□□□ -0.48
RCM1P53972 ERG6YML008C 1152 nt12.02□□□□□ -0.49
RCM1P53972 BOR1YNL275W 1731 nt12□□□□□ -0.49
RCM1P53972 YER188WYER188W 720 nt12□□□□□ -0.49
RCM1P53972 URA6YKL024C 615 nt12□□□□□ -0.49
RCM1P53972 IML3YBR107C 738 nt11.98□□□□□ -0.49
RCM1P53972 FLR1YBR008C 1647 nt11.97□□□□□ -0.49
RCM1P53972 SOD2YHR008C 702 nt11.95□□□□□ -0.5
RCM1P53972 TMA23YMR269W 636 nt11.95□□□□□ -0.5
RCM1P53972 DLD2YDL178W 1593 nt11.95□□□□□ -0.5
RCM1P53972 BIO5YNR056C 1686 nt11.94□□□□□ -0.5
RCM1P53972 YIA6YIL006W 1122 nt11.93□□□□□ -0.5
RCM1P53972 DDI1YER143W 1287 nt11.92□□□□□ -0.5
RCM1P53972 PET8YNL003C 855 nt11.92□□□□□ -0.5
RCM1P53972 IGD1YFR017C 588 nt11.91□□□□□ -0.5
RCM1P53972 YNL024CYNL024C 741 nt11.91□□□□□ -0.5
RCM1P53972 CDD1YLR245C 429 nt11.89□□□□□ -0.51
RCM1P53972 IMO32YGR031W 1029 nt11.85□□□□□ -0.51
RCM1P53972 ZRT3YKL175W 1512 nt11.85□□□□□ -0.51
RCM1P53972 YCP4YCR004C 744 nt11.84□□□□□ -0.51
RCM1P53972 YPS3YLR121C 1527 nt11.84□□□□□ -0.51
RCM1P53972 SAM50YNL026W 1455 nt11.83□□□□□ -0.52
RCM1P53972 FMS1YMR020W 1527 nt11.83□□□□□ -0.52
RCM1P53972 SOL2YCR073W-A 948 nt11.83□□□□□ -0.52
RCM1P53972 HEM13YDR044W 987 nt11.83□□□□□ -0.52
RCM1P53972 LSM5YER146W 282 nt11.83□□□□□ -0.52
RCM1P53972 NAS2YIL007C 663 nt11.83□□□□□ -0.52
RCM1P53972 RSC8YFR037C 1674 nt11.83□□□□□ -0.52
RCM1P53972 OSH7YHR001W 1314 nt11.83□□□□□ -0.52
RCM1P53972 YFR036W-AYFR036W-A 651 nt11.82□□□□□ -0.52
RCM1P53972 tA(AGC)DtA(AGC)D 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)FtA(AGC)F 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)GtA(AGC)G 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)HtA(AGC)H 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)JtA(AGC)J 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)K1tA(AGC)K1 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)K2tA(AGC)K2 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)LtA(AGC)L 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)M1tA(AGC)M1 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)M2tA(AGC)M2 73 nt11.81□□□□□ -0.52
RCM1P53972 tA(AGC)PtA(AGC)P 73 nt11.81□□□□□ -0.52
RCM1P53972 SPS100YHR139C 981 nt11.81□□□□□ -0.52
RCM1P53972 TAT2YOL020W 1779 nt11.79□□□□□ -0.52
RCM1P53972 YDR455CYDR455C 309 nt11.79□□□□□ -0.52
RCM1P53972 YER152W-AYER152W-A 567 nt11.78□□□□□ -0.52
RCM1P53972 YJL067WYJL067W 351 nt11.78□□□□□ -0.52
RCM1P53972 IPL1YPL209C 1104 nt11.78□□□□□ -0.52
RCM1P53972 POP2YNR052C 1302 nt11.77□□□□□ -0.53
RCM1P53972 UME6YDR207C 2511 nt11.76□□□□□ -0.53
RCM1P53972 YCR025CYCR025C 411 nt11.75□□□□□ -0.53
RCM1P53972 KRE1YNL322C 942 nt11.75□□□□□ -0.53
RCM1P53972 SPP2YOR148C 558 nt11.74□□□□□ -0.53
RCM1P53972 SWM1YDR260C 513 nt11.73□□□□□ -0.53
RCM1P53972 LYS20YDL182W 1287 nt11.71□□□□□ -0.53
RCM1P53972 RRT8YOL048C 1029 nt11.69□□□□□ -0.54
RCM1P53972 ACH1YBL015W 1581 nt11.69□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms