Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 HXT1YHR094C 1713 nt10.95□□□□□ -0.66
RPT4P53549 IRC24YIR036C 792 nt10.94□□□□□ -0.66
RPT4P53549 SAM3YPL274W 1764 nt10.93□□□□□ -0.66
RPT4P53549 LSB5YCL034W 1065 nt10.93□□□□□ -0.66
RPT4P53549 TOA2YKL058W 369 nt10.92□□□□□ -0.66
RPT4P53549 SNZ1YMR096W 894 nt10.91□□□□□ -0.66
RPT4P53549 SSN3YPL042C 1668 nt10.9□□□□□ -0.66
RPT4P53549 TAF13YML098W 504 nt10.9□□□□□ -0.66
RPT4P53549 SLG1YOR008C 1137 nt10.9□□□□□ -0.66
RPT4P53549 RPT5YOR117W 1305 nt10.88□□□□□ -0.67
RPT4P53549 PHO23YNL097C 993 nt10.88□□□□□ -0.67
RPT4P53549 BNI5YNL166C 1347 nt10.87□□□□□ -0.67
RPT4P53549 YMR262WYMR262W 942 nt10.87□□□□□ -0.67
RPT4P53549 GND2YGR256W 1479 nt10.87□□□□□ -0.67
RPT4P53549 SNF1YDR477W 1902 nt10.86□□□□□ -0.67
RPT4P53549 TIM44YIL022W 1296 nt10.85□□□□□ -0.67
RPT4P53549 HIF1YLL022C 1158 nt10.85□□□□□ -0.67
RPT4P53549 TRT2tT(CGU)K 72 nt10.84□□□□□ -0.67
RPT4P53549 NUC1YJL208C 990 nt10.84□□□□□ -0.67
RPT4P53549 RIB7YBR153W 735 nt10.84□□□□□ -0.67
RPT4P53549 UFO1YML088W 2007 nt10.83□□□□□ -0.68
RPT4P53549 RDN37-1RDN37-1 5354 nt10.83□□□□□ -0.68
RPT4P53549 RDN37-2RDN37-2 5354 nt10.83□□□□□ -0.68
RPT4P53549 MSC1YML128C 1542 nt10.83□□□□□ -0.68
RPT4P53549 YJR114WYJR114W 393 nt10.82□□□□□ -0.68
RPT4P53549 SHY1YGR112W 1170 nt10.81□□□□□ -0.68
RPT4P53549 YPR126CYPR126C 309 nt10.81□□□□□ -0.68
RPT4P53549 TIP1YBR067C 633 nt10.79□□□□□ -0.68
RPT4P53549 PAR32YDL173W 888 nt10.78□□□□□ -0.68
RPT4P53549 MHF1YOL086W-A 273 nt10.78□□□□□ -0.68
RPT4P53549 TUB4YLR212C 1422 nt10.77□□□□□ -0.68
RPT4P53549 TPS1YBR126C 1488 nt10.77□□□□□ -0.69
RPT4P53549 APS2YJR058C 444 nt10.76□□□□□ -0.69
RPT4P53549 POT1YIL160C 1254 nt10.75□□□□□ -0.69
RPT4P53549 GSF2YML048W 1212 nt10.75□□□□□ -0.69
RPT4P53549 SEC61YLR378C 1443 nt10.75□□□□□ -0.69
RPT4P53549 CTI6YPL181W 1521 nt10.74□□□□□ -0.69
RPT4P53549 OXA1YER154W 1209 nt10.73□□□□□ -0.69
RPT4P53549 DAK2YFL053W 1776 nt10.72□□□□□ -0.69
RPT4P53549 FUB1YCR076C 753 nt10.72□□□□□ -0.69
RPT4P53549 OYE2YHR179W 1203 nt10.71□□□□□ -0.69
RPT4P53549 OYE3YPL171C 1203 nt10.71□□□□□ -0.69
RPT4P53549 NIF3YGL221C 867 nt10.7□□□□□ -0.7
RPT4P53549 URA6YKL024C 615 nt10.7□□□□□ -0.7
RPT4P53549 SAM2YDR502C 1155 nt10.69□□□□□ -0.7
RPT4P53549 RIB1YBL033C 1038 nt10.69□□□□□ -0.7
RPT4P53549 RAS2YNL098C 969 nt10.69□□□□□ -0.7
RPT4P53549 EAF3YPR023C 1206 nt10.69□□□□□ -0.7
RPT4P53549 BOR1YNL275W 1731 nt10.68□□□□□ -0.7
RPT4P53549 YER188WYER188W 720 nt10.68□□□□□ -0.7
RPT4P53549 IML3YBR107C 738 nt10.67□□□□□ -0.7
RPT4P53549 ERG6YML008C 1152 nt10.66□□□□□ -0.7
RPT4P53549 FLR1YBR008C 1647 nt10.63□□□□□ -0.71
RPT4P53549 TMA23YMR269W 636 nt10.62□□□□□ -0.71
RPT4P53549 DLD2YDL178W 1593 nt10.61□□□□□ -0.71
RPT4P53549 BIO5YNR056C 1686 nt10.61□□□□□ -0.71
RPT4P53549 YIA6YIL006W 1122 nt10.61□□□□□ -0.71
RPT4P53549 PET8YNL003C 855 nt10.61□□□□□ -0.71
RPT4P53549 YNL024CYNL024C 741 nt10.61□□□□□ -0.71
RPT4P53549 SOD2YHR008C 702 nt10.59□□□□□ -0.71
RPT4P53549 IGD1YFR017C 588 nt10.58□□□□□ -0.72
RPT4P53549 DDI1YER143W 1287 nt10.57□□□□□ -0.72
RPT4P53549 CDD1YLR245C 429 nt10.56□□□□□ -0.72
RPT4P53549 ZRT3YKL175W 1512 nt10.56□□□□□ -0.72
RPT4P53549 YCP4YCR004C 744 nt10.54□□□□□ -0.72
RPT4P53549 IMO32YGR031W 1029 nt10.53□□□□□ -0.72
RPT4P53549 YPS3YLR121C 1527 nt10.53□□□□□ -0.72
RPT4P53549 HEM13YDR044W 987 nt10.52□□□□□ -0.73
RPT4P53549 FMS1YMR020W 1527 nt10.52□□□□□ -0.73
RPT4P53549 OSH7YHR001W 1314 nt10.52□□□□□ -0.73
RPT4P53549 RSC8YFR037C 1674 nt10.51□□□□□ -0.73
RPT4P53549 SAM50YNL026W 1455 nt10.51□□□□□ -0.73
RPT4P53549 SOL2YCR073W-A 948 nt10.5□□□□□ -0.73
RPT4P53549 LSM5YER146W 282 nt10.5□□□□□ -0.73
RPT4P53549 YFR036W-AYFR036W-A 651 nt10.5□□□□□ -0.73
RPT4P53549 SPS100YHR139C 981 nt10.5□□□□□ -0.73
RPT4P53549 NAS2YIL007C 663 nt10.5□□□□□ -0.73
RPT4P53549 tA(AGC)DtA(AGC)D 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)FtA(AGC)F 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)GtA(AGC)G 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)HtA(AGC)H 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)JtA(AGC)J 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)K1tA(AGC)K1 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)K2tA(AGC)K2 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)LtA(AGC)L 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)M1tA(AGC)M1 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)M2tA(AGC)M2 73 nt10.49□□□□□ -0.73
RPT4P53549 tA(AGC)PtA(AGC)P 73 nt10.49□□□□□ -0.73
RPT4P53549 YJL067WYJL067W 351 nt10.48□□□□□ -0.73
RPT4P53549 YDR455CYDR455C 309 nt10.47□□□□□ -0.73
RPT4P53549 IPL1YPL209C 1104 nt10.47□□□□□ -0.73
RPT4P53549 TAT2YOL020W 1779 nt10.47□□□□□ -0.73
RPT4P53549 POP2YNR052C 1302 nt10.46□□□□□ -0.73
RPT4P53549 YER152W-AYER152W-A 567 nt10.45□□□□□ -0.74
RPT4P53549 YCR025CYCR025C 411 nt10.44□□□□□ -0.74
RPT4P53549 SPP2YOR148C 558 nt10.44□□□□□ -0.74
RPT4P53549 KRE1YNL322C 942 nt10.43□□□□□ -0.74
RPT4P53549 SWM1YDR260C 513 nt10.42□□□□□ -0.74
RPT4P53549 RRT8YOL048C 1029 nt10.4□□□□□ -0.74
RPT4P53549 ACH1YBL015W 1581 nt10.39□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms