Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NEK4P51957 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NEK4P51957 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NEK4P51957 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.79■■■□□ 2.68
NEK4P51957 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.79■■■□□ 2.68
NEK4P51957 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.78■■■□□ 2.68
NEK4P51957 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
NEK4P51957 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEK4P51957 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEK4P51957 AL135925.1-201ENST00000605920 1701 ntBASIC31.76■■■□□ 2.67
NEK4P51957 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
NEK4P51957 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
NEK4P51957 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NEK4P51957 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
NEK4P51957 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
NEK4P51957 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
NEK4P51957 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.74■■■□□ 2.67
NEK4P51957 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NEK4P51957 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.74■■■□□ 2.67
NEK4P51957 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
NEK4P51957 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NEK4P51957 WASH5P-204ENST00000632292 975 ntBASIC31.72■■■□□ 2.67
NEK4P51957 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NEK4P51957 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
NEK4P51957 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.7■■■□□ 2.67
NEK4P51957 AL133380.1-201ENST00000506013 324 ntBASIC31.7■■■□□ 2.67
NEK4P51957 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.7■■■□□ 2.67
NEK4P51957 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.7■■■□□ 2.67
NEK4P51957 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.7■■■□□ 2.67
NEK4P51957 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.67■■■□□ 2.66
NEK4P51957 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
NEK4P51957 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.65■■■□□ 2.66
NEK4P51957 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.64■■■□□ 2.66
NEK4P51957 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.64■■■□□ 2.66
NEK4P51957 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
NEK4P51957 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
NEK4P51957 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NEK4P51957 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NEK4P51957 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NEK4P51957 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.56■■■□□ 2.64
NEK4P51957 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.56■■■□□ 2.64
NEK4P51957 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
NEK4P51957 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NEK4P51957 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NEK4P51957 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.52■■■□□ 2.64
NEK4P51957 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NEK4P51957 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
NEK4P51957 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.64
NEK4P51957 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.51■■■□□ 2.63
NEK4P51957 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
NEK4P51957 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
NEK4P51957 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEK4P51957 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEK4P51957 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEK4P51957 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
NEK4P51957 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
NEK4P51957 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
NEK4P51957 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NEK4P51957 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
NEK4P51957 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NEK4P51957 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.44■■■□□ 2.62
NEK4P51957 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NEK4P51957 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.43■■■□□ 2.62
NEK4P51957 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEK4P51957 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEK4P51957 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEK4P51957 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NEK4P51957 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NEK4P51957 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NEK4P51957 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NEK4P51957 RARRES2P7-201ENST00000567349 469 ntBASIC31.4■■■□□ 2.62
NEK4P51957 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NEK4P51957 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NEK4P51957 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NEK4P51957 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
NEK4P51957 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
NEK4P51957 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NEK4P51957 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
NEK4P51957 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
NEK4P51957 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NEK4P51957 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NEK4P51957 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NEK4P51957 SETD8P1-201ENST00000623146 1180 ntBASIC31.34■■■□□ 2.61
NEK4P51957 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NEK4P51957 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
NEK4P51957 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NEK4P51957 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NEK4P51957 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NEK4P51957 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
NEK4P51957 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.32■■■□□ 2.6
NEK4P51957 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NEK4P51957 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.31■■■□□ 2.6
NEK4P51957 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
NEK4P51957 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
NEK4P51957 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NEK4P51957 AL139393.2-201ENST00000608721 2025 ntBASIC31.3■■■□□ 2.6
NEK4P51957 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NEK4P51957 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NEK4P51957 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NEK4P51957 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms