Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 UME6YDR207C 2511 nt11.76□□□□□ -0.53
RTR1P40084 STE4YOR212W 1272 nt11.75□□□□□ -0.53
RTR1P40084 YAT1YAR035W 2064 nt11.74□□□□□ -0.53
RTR1P40084 PET8YNL003C 855 nt11.74□□□□□ -0.53
RTR1P40084 PHO23YNL097C 993 nt11.74□□□□□ -0.53
RTR1P40084 SAM2YDR502C 1155 nt11.73□□□□□ -0.53
RTR1P40084 YLR349WYLR349W 507 nt11.73□□□□□ -0.53
RTR1P40084 SEC61YLR378C 1443 nt11.72□□□□□ -0.53
RTR1P40084 MSC1YML128C 1542 nt11.71□□□□□ -0.53
RTR1P40084 LSB5YCL034W 1065 nt11.71□□□□□ -0.53
RTR1P40084 SAM3YPL274W 1764 nt11.7□□□□□ -0.54
RTR1P40084 OXA1YER154W 1209 nt11.7□□□□□ -0.54
RTR1P40084 YEL008WYEL008W 381 nt11.68□□□□□ -0.54
RTR1P40084 NUC1YJL208C 990 nt11.68□□□□□ -0.54
RTR1P40084 FLR1YBR008C 1647 nt11.68□□□□□ -0.54
RTR1P40084 RDN25-1RDN25-1 3396 nt11.67□□□□□ -0.54
RTR1P40084 RDN25-2RDN25-2 3396 nt11.67□□□□□ -0.54
RTR1P40084 YJL118WYJL118W 660 nt11.67□□□□□ -0.54
RTR1P40084 DLD2YDL178W 1593 nt11.66□□□□□ -0.54
RTR1P40084 RPT5YOR117W 1305 nt11.64□□□□□ -0.55
RTR1P40084 FUB1YCR076C 753 nt11.64□□□□□ -0.55
RTR1P40084 YER188WYER188W 720 nt11.64□□□□□ -0.55
RTR1P40084 FMS1YMR020W 1527 nt11.64□□□□□ -0.55
RTR1P40084 GAL3YDR009W 1563 nt11.63□□□□□ -0.55
RTR1P40084 RSC8YFR037C 1674 nt11.62□□□□□ -0.55
RTR1P40084 YPS3YLR121C 1527 nt11.6□□□□□ -0.55
RTR1P40084 GPN2YOR262W 1044 nt11.6□□□□□ -0.55
RTR1P40084 CWC15YDR163W 528 nt11.59□□□□□ -0.55
RTR1P40084 RAS2YNL098C 969 nt11.59□□□□□ -0.55
RTR1P40084 INA1YLR413W 2028 nt11.59□□□□□ -0.55
RTR1P40084 SPP2YOR148C 558 nt11.58□□□□□ -0.56
RTR1P40084 RPC82YPR190C 1965 nt11.58□□□□□ -0.56
RTR1P40084 ADH7YCR105W 1086 nt11.57□□□□□ -0.56
RTR1P40084 TPS1YBR126C 1488 nt11.57□□□□□ -0.56
RTR1P40084 RIB7YBR153W 735 nt11.55□□□□□ -0.56
RTR1P40084 ACH1YBL015W 1581 nt11.54□□□□□ -0.56
RTR1P40084 HEM13YDR044W 987 nt11.54□□□□□ -0.56
RTR1P40084 OYE2YHR179W 1203 nt11.54□□□□□ -0.56
RTR1P40084 PAU15YIR041W 375 nt11.54□□□□□ -0.56
RTR1P40084 CCT5YJR064W 1689 nt11.54□□□□□ -0.56
RTR1P40084 EAF3YPR023C 1206 nt11.53□□□□□ -0.56
RTR1P40084 CPD1YGR247W 720 nt11.52□□□□□ -0.57
RTR1P40084 OSH7YHR001W 1314 nt11.51□□□□□ -0.57
RTR1P40084 SNZ1YMR096W 894 nt11.5□□□□□ -0.57
RTR1P40084 Q0182Q0182 405 nt11.48□□□□□ -0.57
RTR1P40084 SOL2YCR073W-A 948 nt11.45□□□□□ -0.58
RTR1P40084 TAT2YOL020W 1779 nt11.45□□□□□ -0.58
RTR1P40084 YIL100C-AYIL100C-A 339 nt11.44□□□□□ -0.58
RTR1P40084 YOR325WYOR325W 474 nt11.43□□□□□ -0.58
RTR1P40084 DDI1YER143W 1287 nt11.42□□□□□ -0.58
RTR1P40084 TMA23YMR269W 636 nt11.42□□□□□ -0.58
RTR1P40084 VPS62YGR141W 1404 nt11.42□□□□□ -0.58
RTR1P40084 SPT20YOL148C 1815 nt11.42□□□□□ -0.58
RTR1P40084 THI72YOR192C 1800 nt11.42□□□□□ -0.58
RTR1P40084 LSM5YER146W 282 nt11.4□□□□□ -0.58
RTR1P40084 YPR126CYPR126C 309 nt11.4□□□□□ -0.58
RTR1P40084 DAK2YFL053W 1776 nt11.39□□□□□ -0.59
RTR1P40084 YDR455CYDR455C 309 nt11.39□□□□□ -0.59
RTR1P40084 RPM1RPM1 483 nt11.36□□□□□ -0.59
RTR1P40084 ILV3YJR016C 1758 nt11.36□□□□□ -0.59
RTR1P40084 YDL086WYDL086W 822 nt11.35□□□□□ -0.59
RTR1P40084 ESS1YJR017C 513 nt11.35□□□□□ -0.59
RTR1P40084 CCT2YIL142W 1584 nt11.35□□□□□ -0.59
RTR1P40084 CMP2YML057W 1815 nt11.33□□□□□ -0.6
RTR1P40084 IMO32YGR031W 1029 nt11.33□□□□□ -0.6
RTR1P40084 TAF13YML098W 504 nt11.33□□□□□ -0.6
RTR1P40084 CTI6YPL181W 1521 nt11.32□□□□□ -0.6
RTR1P40084 tS(GCU)LtS(GCU)L 80 nt11.32□□□□□ -0.6
RTR1P40084 OPI10YOL032W 741 nt11.32□□□□□ -0.6
RTR1P40084 ASP3-1YLR155C 1089 nt11.3□□□□□ -0.6
RTR1P40084 ASP3-2YLR157C 1089 nt11.3□□□□□ -0.6
RTR1P40084 ASP3-3YLR158C 1089 nt11.3□□□□□ -0.6
RTR1P40084 ASP3-4YLR160C 1089 nt11.3□□□□□ -0.6
RTR1P40084 PAU5YFL020C 369 nt11.29□□□□□ -0.6
RTR1P40084 YNL024CYNL024C 741 nt11.29□□□□□ -0.6
RTR1P40084 MHF1YOL086W-A 273 nt11.29□□□□□ -0.6
RTR1P40084 PGC1YPL206C 966 nt11.28□□□□□ -0.6
RTR1P40084 IML3YBR107C 738 nt11.28□□□□□ -0.6
RTR1P40084 ERG13YML126C 1476 nt11.27□□□□□ -0.6
RTR1P40084 YMR262WYMR262W 942 nt11.27□□□□□ -0.61
RTR1P40084 LSB6YJL100W 1824 nt11.27□□□□□ -0.61
RTR1P40084 YFR036W-AYFR036W-A 651 nt11.25□□□□□ -0.61
RTR1P40084 AIM1YAL046C 357 nt11.25□□□□□ -0.61
RTR1P40084 MUP1YGR055W 1725 nt11.24□□□□□ -0.61
RTR1P40084 RRT8YOL048C 1029 nt11.24□□□□□ -0.61
RTR1P40084 POT1YIL160C 1254 nt11.23□□□□□ -0.61
RTR1P40084 BET2YPR176C 978 nt11.23□□□□□ -0.61
RTR1P40084 ADE8YDR408C 645 nt11.2□□□□□ -0.62
RTR1P40084 SPS100YHR139C 981 nt11.2□□□□□ -0.62
RTR1P40084 STP3YLR375W 1032 nt11.19□□□□□ -0.62
RTR1P40084 YBR232CYBR232C 360 nt11.19□□□□□ -0.62
RTR1P40084 APS2YJR058C 444 nt11.18□□□□□ -0.62
RTR1P40084 ARO8YGL202W 1503 nt11.18□□□□□ -0.62
RTR1P40084 HOL1YNR055C 1761 nt11.17□□□□□ -0.62
RTR1P40084 NIF3YGL221C 867 nt11.16□□□□□ -0.62
RTR1P40084 SAC7YDR389W 1965 nt11.16□□□□□ -0.62
RTR1P40084 DIG1YPL049C 1359 nt11.16□□□□□ -0.62
RTR1P40084 GSF2YML048W 1212 nt11.15□□□□□ -0.62
RTR1P40084 QDR2YIL121W 1629 nt11.15□□□□□ -0.62
RTR1P40084 TUB4YLR212C 1422 nt11.15□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 66.9 ms