Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CKS2P33552 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKS2P33552 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKS2P33552 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKS2P33552 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKS2P33552 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CKS2P33552 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKS2P33552 AC142086.6-201ENST00000621154 1765 ntBASIC19.52■□□□□ 0.72
CKS2P33552 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CKS2P33552 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKS2P33552 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKS2P33552 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CKS2P33552 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CKS2P33552 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKS2P33552 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CKS2P33552 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CKS2P33552 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CKS2P33552 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.5■□□□□ 0.71
CKS2P33552 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CKS2P33552 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CKS2P33552 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.49■□□□□ 0.71
CKS2P33552 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CKS2P33552 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.48■□□□□ 0.71
CKS2P33552 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CKS2P33552 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.47■□□□□ 0.71
CKS2P33552 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CKS2P33552 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CKS2P33552 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CKS2P33552 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.46■□□□□ 0.71
CKS2P33552 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CKS2P33552 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CKS2P33552 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CKS2P33552 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKS2P33552 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CKS2P33552 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKS2P33552 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CKS2P33552 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKS2P33552 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKS2P33552 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CKS2P33552 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKS2P33552 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.42■□□□□ 0.7
CKS2P33552 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKS2P33552 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CKS2P33552 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CKS2P33552 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CKS2P33552 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CKS2P33552 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CKS2P33552 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CKS2P33552 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CKS2P33552 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CKS2P33552 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CKS2P33552 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CKS2P33552 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.36■□□□□ 0.69
CKS2P33552 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CKS2P33552 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CKS2P33552 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.34■□□□□ 0.69
CKS2P33552 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKS2P33552 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CKS2P33552 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKS2P33552 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CKS2P33552 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKS2P33552 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.32■□□□□ 0.68
CKS2P33552 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
CKS2P33552 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.32■□□□□ 0.68
CKS2P33552 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKS2P33552 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CKS2P33552 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.31■□□□□ 0.68
CKS2P33552 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CKS2P33552 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CKS2P33552 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.28■□□□□ 0.68
CKS2P33552 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CKS2P33552 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CKS2P33552 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CKS2P33552 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CKS2P33552 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKS2P33552 AL135925.1-201ENST00000605920 1701 ntBASIC19.27■□□□□ 0.68
CKS2P33552 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKS2P33552 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKS2P33552 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKS2P33552 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKS2P33552 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.25■□□□□ 0.67
CKS2P33552 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms