Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YIA6YIL006W 1122 nt15.73■□□□□ 0.11
XRN1P22147 YMR103CYMR103C 363 nt15.73■□□□□ 0.11
XRN1P22147 YGR259CYGR259C 441 nt15.7■□□□□ 0.1
XRN1P22147 POP2YNR052C 1302 nt15.7■□□□□ 0.1
XRN1P22147 YKR005CYKR005C 1578 nt15.68■□□□□ 0.1
XRN1P22147 YBL086CYBL086C 1401 nt15.67■□□□□ 0.1
XRN1P22147 SAM35YHR083W 990 nt15.67■□□□□ 0.1
XRN1P22147 YER152W-AYER152W-A 567 nt15.63■□□□□ 0.09
XRN1P22147 NUC1YJL208C 990 nt15.63■□□□□ 0.09
XRN1P22147 SSN3YPL042C 1668 nt15.63■□□□□ 0.09
XRN1P22147 GSF2YML048W 1212 nt15.63■□□□□ 0.09
XRN1P22147 QDR2YIL121W 1629 nt15.63■□□□□ 0.09
XRN1P22147 IRC24YIR036C 792 nt15.62■□□□□ 0.09
XRN1P22147 BNI5YNL166C 1347 nt15.6■□□□□ 0.09
XRN1P22147 TOA2YKL058W 369 nt15.59■□□□□ 0.09
XRN1P22147 BRR1YPR057W 1026 nt15.59■□□□□ 0.09
XRN1P22147 YPR126CYPR126C 309 nt15.59■□□□□ 0.09
XRN1P22147 RPT5YOR117W 1305 nt15.58■□□□□ 0.09
XRN1P22147 POT1YIL160C 1254 nt15.58■□□□□ 0.08
XRN1P22147 MHF1YOL086W-A 273 nt15.58■□□□□ 0.08
XRN1P22147 RIB7YBR153W 735 nt15.57■□□□□ 0.08
XRN1P22147 CTI6YPL181W 1521 nt15.55■□□□□ 0.08
XRN1P22147 YCP4YCR004C 744 nt15.52■□□□□ 0.07
XRN1P22147 GND2YGR256W 1479 nt15.52■□□□□ 0.07
XRN1P22147 DBP1YPL119C 1854 nt15.5■□□□□ 0.07
XRN1P22147 HXT1YHR094C 1713 nt15.5■□□□□ 0.07
XRN1P22147 SAM50YNL026W 1455 nt15.49■□□□□ 0.07
XRN1P22147 KRE1YNL322C 942 nt15.48■□□□□ 0.07
XRN1P22147 TPS1YBR126C 1488 nt15.48■□□□□ 0.07
XRN1P22147 NIF3YGL221C 867 nt15.47■□□□□ 0.07
XRN1P22147 PHO23YNL097C 993 nt15.47■□□□□ 0.07
XRN1P22147 LEU9YOR108W 1815 nt15.46■□□□□ 0.06
XRN1P22147 TRT2tT(CGU)K 72 nt15.43■□□□□ 0.06
XRN1P22147 CDD1YLR245C 429 nt15.43■□□□□ 0.06
XRN1P22147 HIF1YLL022C 1158 nt15.42■□□□□ 0.06
XRN1P22147 BUD20YLR074C 501 nt15.4■□□□□ 0.06
XRN1P22147 DAK2YFL053W 1776 nt15.39■□□□□ 0.05
XRN1P22147 YCR025CYCR025C 411 nt15.39■□□□□ 0.05
XRN1P22147 IGD1YFR017C 588 nt15.38■□□□□ 0.05
XRN1P22147 OYE2YHR179W 1203 nt15.38■□□□□ 0.05
XRN1P22147 ACO2YJL200C 2370 nt15.37■□□□□ 0.05
XRN1P22147 MSC1YML128C 1542 nt15.37■□□□□ 0.05
XRN1P22147 SAM2YDR502C 1155 nt15.33■□□□□ 0.04
XRN1P22147 UFO1YML088W 2007 nt15.32■□□□□ 0.04
XRN1P22147 LYS20YDL182W 1287 nt15.32■□□□□ 0.04
XRN1P22147 NAS2YIL007C 663 nt15.32■□□□□ 0.04
XRN1P22147 DDI1YER143W 1287 nt15.31■□□□□ 0.04
XRN1P22147 PAC11YDR488C 1602 nt15.3■□□□□ 0.04
XRN1P22147 tA(AGC)DtA(AGC)D 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)FtA(AGC)F 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)GtA(AGC)G 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)HtA(AGC)H 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)JtA(AGC)J 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)K1tA(AGC)K1 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)K2tA(AGC)K2 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)LtA(AGC)L 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)M1tA(AGC)M1 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)M2tA(AGC)M2 73 nt15.29■□□□□ 0.04
XRN1P22147 tA(AGC)PtA(AGC)P 73 nt15.29■□□□□ 0.04
XRN1P22147 BMT6YLR063W 1098 nt15.29■□□□□ 0.04
XRN1P22147 RAS2YNL098C 969 nt15.27■□□□□ 0.04
XRN1P22147 PRP4YPR178W 1398 nt15.27■□□□□ 0.04
XRN1P22147 IML3YBR107C 738 nt15.27■□□□□ 0.03
XRN1P22147 SWM1YDR260C 513 nt15.25■□□□□ 0.03
XRN1P22147 EAF3YPR023C 1206 nt15.25■□□□□ 0.03
XRN1P22147 FUB1YCR076C 753 nt15.23■□□□□ 0.03
XRN1P22147 IPL1YPL209C 1104 nt15.23■□□□□ 0.03
XRN1P22147 DPS1YLL018C 1674 nt15.22■□□□□ 0.03
XRN1P22147 YER188WYER188W 720 nt15.22■□□□□ 0.03
XRN1P22147 SHY1YGR112W 1170 nt15.22■□□□□ 0.03
XRN1P22147 YNL024CYNL024C 741 nt15.22■□□□□ 0.03
XRN1P22147 TMA23YMR269W 636 nt15.2■□□□□ 0.02
XRN1P22147 SEC61YLR378C 1443 nt15.19■□□□□ 0.02
XRN1P22147 OYE3YPL171C 1203 nt15.18■□□□□ 0.02
XRN1P22147 FLX1YIL134W 936 nt15.17■□□□□ 0.02
XRN1P22147 FLR1YBR008C 1647 nt15.12■□□□□ 0.01
XRN1P22147 LSM5YER146W 282 nt15.11■□□□□ 0.01
XRN1P22147 SPS100YHR139C 981 nt15.1■□□□□ 0.01
XRN1P22147 SPE2YOL052C 1191 nt15.1■□□□□ 0.01
XRN1P22147 SNF1YDR477W 1902 nt15.1■□□□□ 0.01
XRN1P22147 YFR036W-AYFR036W-A 651 nt15.09■□□□□ 0.01
XRN1P22147 OXA1YER154W 1209 nt15.03■□□□□ -0
XRN1P22147 ADH3YMR083W 1128 nt15.03■□□□□ -0
XRN1P22147 PAU21YOR394W 495 nt15.02■□□□□ -0
XRN1P22147 PAU22YPL282C 495 nt15.02■□□□□ -0
XRN1P22147 DLD2YDL178W 1593 nt15.02□□□□□ -0.01
XRN1P22147 TGA1tA(UGC)A 73 nt15.02□□□□□ -0.01
XRN1P22147 tA(UGC)EtA(UGC)E 73 nt15.02□□□□□ -0.01
XRN1P22147 tA(UGC)GtA(UGC)G 73 nt15.02□□□□□ -0.01
XRN1P22147 tA(UGC)LtA(UGC)L 73 nt15.02□□□□□ -0.01
XRN1P22147 tA(UGC)OtA(UGC)O 73 nt15.02□□□□□ -0.01
XRN1P22147 IMO32YGR031W 1029 nt15.01□□□□□ -0.01
XRN1P22147 PHB2YGR231C 933 nt15.01□□□□□ -0.01
XRN1P22147 ADE8YDR408C 645 nt15□□□□□ -0.01
XRN1P22147 URA6YKL024C 615 nt15□□□□□ -0.01
XRN1P22147 YMR007WYMR007W 381 nt15□□□□□ -0.01
XRN1P22147 YOR343CYOR343C 327 nt15□□□□□ -0.01
XRN1P22147 OSH7YHR001W 1314 nt14.98□□□□□ -0.01
XRN1P22147 RSC8YFR037C 1674 nt14.97□□□□□ -0.01
XRN1P22147 ABZ2YMR289W 1125 nt14.97□□□□□ -0.01
Retrieved 100 of 7,029 protein–RNA pairs in 40.6 ms