Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.33□□□□□ -2.787e-8■■■■■ 58.2
TROVE2P10155 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.02□□□□□ -2.412e-11■■■■■ 58.1
TROVE2P10155 DMGDH-205ENST00000520388 661 ntTSL 416.2■□□□□ 0.181e-38■■■■■ 58.1
TROVE2P10155 DMGDH-204ENST00000518707 455 ntTSL 210.69□□□□□ -0.71e-38■■■■■ 58.1
TROVE2P10155 RNY3P1-201ENST00000365085 102 ntBASIC-0.05□□□□□ -2.421e-38■■■■■ 58.1
TROVE2P10155 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.99■□□□□ 0.953e-12■■■■■ 58
TROVE2P10155 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.293e-12■■■■■ 58
TROVE2P10155 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.73■□□□□ 0.273e-12■■■■■ 58
TROVE2P10155 C18orf25-205ENST00000619230 3744 ntTSL 213.13□□□□□ -0.313e-12■■■■■ 58
TROVE2P10155 C18orf25-202ENST00000588730 586 ntTSL 511.3□□□□□ -0.63e-12■■■■■ 58
TROVE2P10155 C18orf25-201ENST00000587591 668 ntTSL 47.83□□□□□ -1.163e-12■■■■■ 58
TROVE2P10155 RNY3P13-201ENST00000365542 102 ntBASIC2.01□□□□□ -2.096e-12■■■■■ 57.9
TROVE2P10155 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.11□□□□□ -2.599e-9■■■■■ 57.9
TROVE2P10155 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.09□□□□□ -2.421e-9■■■■■ 57.6
TROVE2P10155 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.371e-6■■■■■ 57.6
TROVE2P10155 TMEM50B-204ENST00000442441 982 ntTSL 1 (best)16.75■□□□□ 0.271e-6■■■■■ 57.6
TROVE2P10155 TMEM50B-201ENST00000420455 3062 ntTSL 1 (best)13.37□□□□□ -0.271e-6■■■■■ 57.6
TROVE2P10155 TMEM50B-203ENST00000441128 634 ntTSL 53.36□□□□□ -1.871e-6■■■■■ 57.6
TROVE2P10155 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.71□□□□□ -1.661e-12■■■■■ 57.5
TROVE2P10155 RNY3-201ENST00000365484 102 ntBASIC0.06□□□□□ -2.41e-323■■■■■ 57.2
TROVE2P10155 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.15■□□□□ 0.669e-21■■■■■ 57.1
TROVE2P10155 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.239e-21■■■■■ 57.1
TROVE2P10155 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.19□□□□□ -2.69e-21■■■■■ 57.1
TROVE2P10155 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.611e-19■■■■■ 56.5
TROVE2P10155 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.611e-19■■■■■ 56.5
TROVE2P10155 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.611e-19■■■■■ 56.5
TROVE2P10155 Y_RNA.473-201ENST00000384333 102 ntBASIC0.68□□□□□ -2.31e-6■■■■■ 56.4
TROVE2P10155 Y_RNA.485-201ENST00000384395 102 ntBASIC0.14□□□□□ -2.393e-12■■■■■ 56.4
TROVE2P10155 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.521e-13■■■■■ 56.2
TROVE2P10155 PSAT1-202ENST00000376588 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.541e-13■■■■■ 56.2
TROVE2P10155 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.311e-9■■■■■ 56.1
TROVE2P10155 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.671e-9■■■■■ 56.1
TROVE2P10155 Y_RNA.428-201ENST00000384078 102 ntBASIC0.1□□□□□ -2.399e-9■■■■■ 55.6
TROVE2P10155 LRMP-202ENST00000361433 2715 ntTSL 1 (best)8.83□□□□□ -13e-10■■■■■ 55.6
TROVE2P10155 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.083e-10■■■■■ 55.6
TROVE2P10155 LRMP-206ENST00000549437 2544 ntTSL 27.56□□□□□ -1.23e-10■■■■■ 55.6
TROVE2P10155 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.33e-10■■■■■ 55.6
TROVE2P10155 LRMP-214ENST00000555877 888 ntTSL 36.83□□□□□ -1.323e-10■■■■■ 55.6
TROVE2P10155 LRMP-203ENST00000536173 2120 ntAPPRIS ALT2 TSL 25.87□□□□□ -1.473e-10■■■■■ 55.6
TROVE2P10155 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.743e-10■■■■■ 55.6
TROVE2P10155 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.83e-10■■■■■ 55.6
TROVE2P10155 LRMP-213ENST00000555194 359 ntTSL 20.71□□□□□ -2.33e-10■■■■■ 55.6
TROVE2P10155 C12orf42-206ENST00000548196 555 ntTSL 418.88■□□□□ 0.612e-12■■■■■ 55.3
TROVE2P10155 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.412e-12■■■■■ 55.3
TROVE2P10155 C12orf42-202ENST00000546526 866 ntTSL 317.63■□□□□ 0.412e-12■■■■■ 55.3
TROVE2P10155 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.42e-12■■■■■ 55.3
TROVE2P10155 C12orf42-212ENST00000551134 1557 ntTSL 1 (best)15.86■□□□□ 0.132e-12■■■■■ 55.3
TROVE2P10155 C12orf42-203ENST00000547347 2090 ntTSL 215.21■□□□□ 0.032e-12■■■■■ 55.3
TROVE2P10155 C12orf42-215ENST00000552578 831 ntAPPRIS ALT2 TSL 314.33□□□□□ -0.122e-12■■■■■ 55.3
TROVE2P10155 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.272e-12■■■■■ 55.3
TROVE2P10155 C12orf42-207ENST00000548789 936 ntTSL 313.15□□□□□ -0.32e-12■■■■■ 55.3
TROVE2P10155 C12orf42-210ENST00000550497 495 ntTSL 52.13□□□□□ -2.072e-12■■■■■ 55.3
TROVE2P10155 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.284e-12■■■■■ 55.3
TROVE2P10155 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.274e-12■■■■■ 55.3
TROVE2P10155 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.45■□□□□ 0.224e-12■■■■■ 55.3
TROVE2P10155 HFM1-204ENST00000448819 540 ntTSL 57.78□□□□□ -1.164e-12■■■■■ 55.3
TROVE2P10155 HFM1-208ENST00000488023 1699 ntTSL 53.14□□□□□ -1.914e-12■■■■■ 55.3
TROVE2P10155 HFM1-207ENST00000481900 2020 ntTSL 52.51□□□□□ -2.014e-12■■■■■ 55.3
TROVE2P10155 HFM1-202ENST00000427444 672 ntTSL 51.89□□□□□ -2.114e-12■■■■■ 55.3
TROVE2P10155 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.184e-12■■■■■ 55.3
TROVE2P10155 Y_RNA.97-201ENST00000363094 102 ntBASIC1.9□□□□□ -2.111e-10■■■■■ 55.1
TROVE2P10155 Y_RNA.381-201ENST00000365666 102 ntBASIC1.19□□□□□ -2.224e-12■■■■■ 54.4
TROVE2P10155 Y_RNA.67-201ENST00000362870 100 ntBASIC1.47□□□□□ -2.173e-7■■■■■ 54
TROVE2P10155 PBX1-213ENST00000558796 366 ntTSL 59.86□□□□□ -0.834e-17■■■■■ 53.2
TROVE2P10155 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.06□□□□□ -2.424e-17■■■■■ 53.2
TROVE2P10155 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.38■□□□□ 0.696e-9■■■■■ 52.4
TROVE2P10155 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.616e-9■■■■■ 52.4
TROVE2P10155 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.361e-17■■■■■ 52.4
TROVE2P10155 PCNX3-202ENST00000439247 3104 ntTSL 1 (best)14.26□□□□□ -0.132e-42■■■■■ 52.4
TROVE2P10155 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.61□□□□□ -2.994e-6■■■■■ 52.1
TROVE2P10155 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.32□□□□□ -2.623e-11■■■■■ 51.9
TROVE2P10155 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.4□□□□□ -2.472e-84■■■■■ 51.8
TROVE2P10155 Y_RNA.80-201ENST00000362996 102 ntBASIC0.14□□□□□ -2.398e-22■■■■■ 51.8
TROVE2P10155 WDR82-203ENST00000469000 587 ntTSL 513.61□□□□□ -0.237e-12■■■■■ 51.1
TROVE2P10155 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.47e-12■■■■■ 51.1
TROVE2P10155 WDR82-202ENST00000463624 574 ntTSL 412.07□□□□□ -0.487e-12■■■■■ 51.1
TROVE2P10155 MIRLET7G-201ENST00000362280 84 ntBASIC2.44□□□□□ -2.027e-12■■■■■ 51.1
TROVE2P10155 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.563e-22■■■■■ 51
TROVE2P10155 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.33e-22■■■■■ 51
TROVE2P10155 BRD2-213ENST00000495733 3404 ntTSL 215.72■□□□□ 0.113e-22■■■■■ 51
TROVE2P10155 BRD2-212ENST00000482914 4834 ntTSL 1 (best)15.18■□□□□ 0.023e-22■■■■■ 51
TROVE2P10155 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)14.13□□□□□ -0.153e-22■■■■■ 51
TROVE2P10155 BRD2-206ENST00000456339 887 ntTSL 412.59□□□□□ -0.393e-22■■■■■ 51
TROVE2P10155 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.423e-22■■■■■ 51
TROVE2P10155 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)12.44□□□□□ -0.423e-22■■■■■ 51
TROVE2P10155 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.773e-22■■■■■ 51
TROVE2P10155 PRRC2C-208ENST00000476522 1931 ntTSL 512.76□□□□□ -0.374e-11■■■■■ 50.9
TROVE2P10155 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.97□□□□□ -0.814e-11■■■■■ 50.9
TROVE2P10155 CLNS1A-206ENST00000526761 415 ntTSL 37.66□□□□□ -1.181e-19■■■■■ 50.5
TROVE2P10155 RNY3P4-201ENST00000384428 101 ntBASIC0.3□□□□□ -2.366e-18■■■■■ 49.9
TROVE2P10155 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.639e-11■■■■■ 49.6
TROVE2P10155 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.999e-11■■■■■ 49.6
TROVE2P10155 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.2□□□□□ -2.769e-11■■■■■ 49.6
TROVE2P10155 Y_RNA.691-201ENST00000516611 103 ntBASIC0.24□□□□□ -2.375e-7■■■■■ 48.4
TROVE2P10155 ATPAF1-211ENST00000534216 693 ntTSL 53.1□□□□□ -1.912e-8■■■■■ 48
TROVE2P10155 Y_RNA.101-201ENST00000363154 102 ntBASIC0.47□□□□□ -2.339e-9■■■■■ 47.7
TROVE2P10155 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.343e-10■■■■■ 47.4
TROVE2P10155 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.343e-10■■■■■ 47.4
TROVE2P10155 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.343e-10■■■■■ 47.4
TROVE2P10155 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.39■■□□□ 1.333e-10■■■■■ 47.4
Retrieved 100 of 4,203 protein–RNA pairs in 327.2 ms