Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
MRPL3P09001 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
MRPL3P09001 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
MRPL3P09001 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MRPL3P09001 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
MRPL3P09001 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
MRPL3P09001 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 AP002365.1-201ENST00000603448 772 ntBASIC23.81■■□□□ 1.4
MRPL3P09001 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.8■■□□□ 1.4
MRPL3P09001 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MRPL3P09001 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MRPL3P09001 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.78■■□□□ 1.4
MRPL3P09001 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MRPL3P09001 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MRPL3P09001 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
MRPL3P09001 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MRPL3P09001 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MRPL3P09001 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
MRPL3P09001 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.76■■□□□ 1.39
MRPL3P09001 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MRPL3P09001 AL135925.1-201ENST00000605920 1701 ntBASIC23.75■■□□□ 1.39
MRPL3P09001 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MRPL3P09001 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.73■■□□□ 1.39
MRPL3P09001 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.73■■□□□ 1.39
MRPL3P09001 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.72■■□□□ 1.39
MRPL3P09001 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
MRPL3P09001 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
MRPL3P09001 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MRPL3P09001 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MRPL3P09001 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MRPL3P09001 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
MRPL3P09001 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MRPL3P09001 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MRPL3P09001 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MRPL3P09001 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
MRPL3P09001 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MRPL3P09001 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
MRPL3P09001 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MRPL3P09001 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MRPL3P09001 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
MRPL3P09001 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
MRPL3P09001 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MRPL3P09001 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MRPL3P09001 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
MRPL3P09001 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MRPL3P09001 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
MRPL3P09001 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MRPL3P09001 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MRPL3P09001 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MRPL3P09001 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MRPL3P09001 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.63■■□□□ 1.37
MRPL3P09001 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MRPL3P09001 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MRPL3P09001 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MRPL3P09001 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
MRPL3P09001 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.61■■□□□ 1.37
MRPL3P09001 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.61■■□□□ 1.37
MRPL3P09001 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MRPL3P09001 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.6■■□□□ 1.37
MRPL3P09001 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
MRPL3P09001 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.59■■□□□ 1.37
MRPL3P09001 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
MRPL3P09001 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
MRPL3P09001 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MRPL3P09001 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MRPL3P09001 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MRPL3P09001 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
MRPL3P09001 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MRPL3P09001 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.56■■□□□ 1.36
MRPL3P09001 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.56■■□□□ 1.36
MRPL3P09001 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MRPL3P09001 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
MRPL3P09001 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.56■■□□□ 1.36
MRPL3P09001 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.56■■□□□ 1.36
MRPL3P09001 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.55■■□□□ 1.36
MRPL3P09001 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MRPL3P09001 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
MRPL3P09001 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.53■■□□□ 1.36
MRPL3P09001 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MRPL3P09001 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MRPL3P09001 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MRPL3P09001 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.52■■□□□ 1.36
MRPL3P09001 WASH5P-204ENST00000632292 975 ntBASIC23.52■■□□□ 1.36
MRPL3P09001 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.5■■□□□ 1.35
MRPL3P09001 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms