Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HMGN1P05114 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
HMGN1P05114 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.09■■□□□ 1.45
HMGN1P05114 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HMGN1P05114 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.09■■□□□ 1.45
HMGN1P05114 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGN1P05114 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.08■■□□□ 1.45
HMGN1P05114 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
HMGN1P05114 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGN1P05114 AL135925.1-201ENST00000605920 1701 ntBASIC24.07■■□□□ 1.44
HMGN1P05114 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGN1P05114 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HMGN1P05114 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
HMGN1P05114 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGN1P05114 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGN1P05114 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HMGN1P05114 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
HMGN1P05114 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.02■■□□□ 1.44
HMGN1P05114 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HMGN1P05114 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
HMGN1P05114 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HMGN1P05114 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
HMGN1P05114 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
HMGN1P05114 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HMGN1P05114 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HMGN1P05114 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
HMGN1P05114 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HMGN1P05114 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
HMGN1P05114 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.95■■□□□ 1.42
HMGN1P05114 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HMGN1P05114 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.95■■□□□ 1.42
HMGN1P05114 AP002365.1-201ENST00000603448 772 ntBASIC23.95■■□□□ 1.42
HMGN1P05114 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
HMGN1P05114 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HMGN1P05114 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HMGN1P05114 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
HMGN1P05114 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HMGN1P05114 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.92■■□□□ 1.42
HMGN1P05114 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HMGN1P05114 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
HMGN1P05114 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HMGN1P05114 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.9■■□□□ 1.42
HMGN1P05114 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HMGN1P05114 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HMGN1P05114 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HMGN1P05114 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HMGN1P05114 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.87■■□□□ 1.41
HMGN1P05114 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGN1P05114 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HMGN1P05114 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.85■■□□□ 1.41
HMGN1P05114 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGN1P05114 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.85■■□□□ 1.41
HMGN1P05114 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
HMGN1P05114 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
HMGN1P05114 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
HMGN1P05114 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
HMGN1P05114 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HMGN1P05114 AC142086.6-201ENST00000621154 1765 ntBASIC23.83■■□□□ 1.41
HMGN1P05114 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.83■■□□□ 1.41
HMGN1P05114 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.83■■□□□ 1.41
HMGN1P05114 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGN1P05114 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HMGN1P05114 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.82■■□□□ 1.4
HMGN1P05114 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HMGN1P05114 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HMGN1P05114 WASH5P-204ENST00000632292 975 ntBASIC23.81■■□□□ 1.4
HMGN1P05114 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGN1P05114 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.8■■□□□ 1.4
HMGN1P05114 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGN1P05114 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.79■■□□□ 1.4
HMGN1P05114 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGN1P05114 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.79■■□□□ 1.4
HMGN1P05114 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGN1P05114 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGN1P05114 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
HMGN1P05114 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HMGN1P05114 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGN1P05114 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGN1P05114 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
HMGN1P05114 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGN1P05114 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGN1P05114 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGN1P05114 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGN1P05114 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMGN1P05114 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HMGN1P05114 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
HMGN1P05114 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMGN1P05114 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMGN1P05114 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
HMGN1P05114 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.73■■□□□ 1.39
HMGN1P05114 AL139393.2-201ENST00000608721 2025 ntBASIC23.73■■□□□ 1.39
HMGN1P05114 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.73■■□□□ 1.39
HMGN1P05114 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.72■■□□□ 1.39
HMGN1P05114 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms