Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
HMGCRP04035 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
HMGCRP04035 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.74■■■□□ 2.51
HMGCRP04035 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HMGCRP04035 DUX4L11-201ENST00000611504 1267 ntBASIC30.73■■■□□ 2.51
HMGCRP04035 DUX4L12-201ENST00000614593 1267 ntBASIC30.73■■■□□ 2.51
HMGCRP04035 LINC01971-201ENST00000617888 1048 ntBASIC30.73■■■□□ 2.51
HMGCRP04035 DUX4L14-201ENST00000621227 1267 ntBASIC30.73■■■□□ 2.51
HMGCRP04035 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.73■■■□□ 2.51
HMGCRP04035 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
HMGCRP04035 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
HMGCRP04035 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.72■■■□□ 2.51
HMGCRP04035 CR559946.2-201ENST00000623684 991 ntBASIC30.72■■■□□ 2.51
HMGCRP04035 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.7■■■□□ 2.51
HMGCRP04035 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
HMGCRP04035 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
HMGCRP04035 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
HMGCRP04035 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HMGCRP04035 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.67■■■□□ 2.5
HMGCRP04035 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
HMGCRP04035 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGCRP04035 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGCRP04035 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.63■■■□□ 2.49
HMGCRP04035 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGCRP04035 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGCRP04035 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HMGCRP04035 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HMGCRP04035 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HMGCRP04035 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
HMGCRP04035 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
HMGCRP04035 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.6■■■□□ 2.49
HMGCRP04035 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.6■■■□□ 2.49
HMGCRP04035 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
HMGCRP04035 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
HMGCRP04035 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HMGCRP04035 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HMGCRP04035 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
HMGCRP04035 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HMGCRP04035 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
HMGCRP04035 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.53■■■□□ 2.48
HMGCRP04035 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
HMGCRP04035 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
HMGCRP04035 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
HMGCRP04035 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.52■■■□□ 2.48
HMGCRP04035 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
HMGCRP04035 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
HMGCRP04035 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
HMGCRP04035 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
HMGCRP04035 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.49■■■□□ 2.47
HMGCRP04035 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.49■■■□□ 2.47
HMGCRP04035 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.48■■■□□ 2.47
HMGCRP04035 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
HMGCRP04035 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.46■■■□□ 2.47
HMGCRP04035 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.46■■■□□ 2.47
HMGCRP04035 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
HMGCRP04035 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.43■■■□□ 2.46
HMGCRP04035 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.43■■■□□ 2.46
HMGCRP04035 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
HMGCRP04035 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
HMGCRP04035 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.4■■■□□ 2.46
HMGCRP04035 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.39■■■□□ 2.46
HMGCRP04035 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
HMGCRP04035 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HMGCRP04035 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.38■■■□□ 2.45
HMGCRP04035 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.38■■■□□ 2.45
HMGCRP04035 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.37■■■□□ 2.45
HMGCRP04035 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HMGCRP04035 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.37■■■□□ 2.45
HMGCRP04035 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HMGCRP04035 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HMGCRP04035 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HMGCRP04035 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.36■■■□□ 2.45
HMGCRP04035 DUX4L13-201ENST00000554103 1267 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L15-201ENST00000611059 1267 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L23-201ENST00000615195 1269 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L24-201ENST00000617576 1269 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L22-201ENST00000618238 1269 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L20-201ENST00000619712 1269 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L21-201ENST00000622058 1269 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L10-201ENST00000622460 1267 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 DUX4L25-201ENST00000624915 1269 ntBASIC30.35■■■□□ 2.45
HMGCRP04035 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
HMGCRP04035 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
HMGCRP04035 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
HMGCRP04035 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HMGCRP04035 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.32■■■□□ 2.44
HMGCRP04035 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HMGCRP04035 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
HMGCRP04035 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
HMGCRP04035 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.29■■■□□ 2.44
HMGCRP04035 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
HMGCRP04035 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.28■■■□□ 2.44
HMGCRP04035 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms