Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TRGV3P03979 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV3P03979 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV3P03979 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRGV3P03979 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.87■□□□□ 0.93
TRGV3P03979 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRGV3P03979 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV3P03979 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRGV3P03979 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV3P03979 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV3P03979 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV3P03979 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV3P03979 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV3P03979 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV3P03979 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV3P03979 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.85■□□□□ 0.93
TRGV3P03979 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV3P03979 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRGV3P03979 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV3P03979 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.84■□□□□ 0.93
TRGV3P03979 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV3P03979 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRGV3P03979 MIR762-201ENST00000390236 83 ntBASIC20.83■□□□□ 0.93
TRGV3P03979 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRGV3P03979 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRGV3P03979 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRGV3P03979 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV3P03979 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV3P03979 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV3P03979 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.81■□□□□ 0.92
TRGV3P03979 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV3P03979 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.81■□□□□ 0.92
TRGV3P03979 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRGV3P03979 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TRGV3P03979 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRGV3P03979 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.8■□□□□ 0.92
TRGV3P03979 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRGV3P03979 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV3P03979 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV3P03979 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV3P03979 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.78■□□□□ 0.92
TRGV3P03979 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRGV3P03979 AC005559.1-201ENST00000589661 871 ntBASIC20.76■□□□□ 0.91
TRGV3P03979 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRGV3P03979 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.76■□□□□ 0.91
TRGV3P03979 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.75■□□□□ 0.91
TRGV3P03979 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRGV3P03979 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRGV3P03979 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRGV3P03979 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRGV3P03979 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRGV3P03979 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRGV3P03979 AP006261.1-201ENST00000584783 668 ntBASIC20.73■□□□□ 0.91
TRGV3P03979 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRGV3P03979 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.72■□□□□ 0.91
TRGV3P03979 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV3P03979 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRGV3P03979 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV3P03979 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.71■□□□□ 0.91
TRGV3P03979 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV3P03979 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.7■□□□□ 0.91
TRGV3P03979 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRGV3P03979 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV3P03979 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV3P03979 MIR3665-201ENST00000578708 105 ntBASIC20.7■□□□□ 0.9
TRGV3P03979 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV3P03979 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.7■□□□□ 0.9
TRGV3P03979 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
TRGV3P03979 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV3P03979 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRGV3P03979 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.68■□□□□ 0.9
TRGV3P03979 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRGV3P03979 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.67■□□□□ 0.9
TRGV3P03979 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.66■□□□□ 0.9
TRGV3P03979 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV3P03979 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV3P03979 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV3P03979 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV3P03979 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV3P03979 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV3P03979 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.65■□□□□ 0.9
TRGV3P03979 DUX4L28-201ENST00000623687 678 ntBASIC20.65■□□□□ 0.9
TRGV3P03979 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV3P03979 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV3P03979 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
TRGV3P03979 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRGV3P03979 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRGV3P03979 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.63■□□□□ 0.89
TRGV3P03979 AL162393.1-201ENST00000437852 946 ntBASIC20.63■□□□□ 0.89
TRGV3P03979 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV3P03979 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV3P03979 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV3P03979 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
TRGV3P03979 AL135925.1-201ENST00000605920 1701 ntBASIC20.61■□□□□ 0.89
TRGV3P03979 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.6■□□□□ 0.89
TRGV3P03979 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV3P03979 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV3P03979 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV3P03979 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.59■□□□□ 0.89
TRGV3P03979 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms