Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CLDN1O95832 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN1O95832 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN1O95832 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CLDN1O95832 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLDN1O95832 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLDN1O95832 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLDN1O95832 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLDN1O95832 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CLDN1O95832 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.89■■□□□ 1.41
CLDN1O95832 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.89■■□□□ 1.41
CLDN1O95832 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLDN1O95832 LINC01971-201ENST00000617888 1048 ntBASIC23.89■■□□□ 1.41
CLDN1O95832 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.87■■□□□ 1.41
CLDN1O95832 MIR6090-201ENST00000622481 60 ntBASIC23.87■■□□□ 1.41
CLDN1O95832 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLDN1O95832 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.87■■□□□ 1.41
CLDN1O95832 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CLDN1O95832 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.86■■□□□ 1.41
CLDN1O95832 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLDN1O95832 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLDN1O95832 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.84■■□□□ 1.41
CLDN1O95832 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN1O95832 AC108673.1-201ENST00000510422 1159 ntBASIC23.83■■□□□ 1.41
CLDN1O95832 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN1O95832 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN1O95832 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN1O95832 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN1O95832 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN1O95832 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN1O95832 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN1O95832 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.8■■□□□ 1.4
CLDN1O95832 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN1O95832 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN1O95832 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.78■■□□□ 1.4
CLDN1O95832 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CLDN1O95832 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN1O95832 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN1O95832 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN1O95832 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.74■■□□□ 1.39
CLDN1O95832 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.74■■□□□ 1.39
CLDN1O95832 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN1O95832 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CLDN1O95832 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN1O95832 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN1O95832 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CLDN1O95832 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN1O95832 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN1O95832 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.72■■□□□ 1.39
CLDN1O95832 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN1O95832 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.71■■□□□ 1.39
CLDN1O95832 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN1O95832 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
CLDN1O95832 RARRES2P2-201ENST00000394842 485 ntBASIC23.7■■□□□ 1.38
CLDN1O95832 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLDN1O95832 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLDN1O95832 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN1O95832 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN1O95832 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.68■■□□□ 1.38
CLDN1O95832 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN1O95832 ABHD17AP5-201ENST00000580133 923 ntBASIC23.67■■□□□ 1.38
CLDN1O95832 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN1O95832 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CLDN1O95832 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN1O95832 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.66■■□□□ 1.38
CLDN1O95832 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CLDN1O95832 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN1O95832 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CLDN1O95832 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CLDN1O95832 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLDN1O95832 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.64■■□□□ 1.37
CLDN1O95832 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLDN1O95832 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN1O95832 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLDN1O95832 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.61■■□□□ 1.37
CLDN1O95832 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLDN1O95832 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLDN1O95832 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.6■■□□□ 1.37
CLDN1O95832 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN1O95832 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN1O95832 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.59■■□□□ 1.37
CLDN1O95832 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN1O95832 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.59■■□□□ 1.37
CLDN1O95832 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN1O95832 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.59■■□□□ 1.37
CLDN1O95832 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN1O95832 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CLDN1O95832 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L13-201ENST00000554103 1267 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L15-201ENST00000611059 1267 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L23-201ENST00000615195 1269 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L24-201ENST00000617576 1269 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L22-201ENST00000618238 1269 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L20-201ENST00000619712 1269 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L21-201ENST00000622058 1269 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L10-201ENST00000622460 1267 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 DUX4L25-201ENST00000624915 1269 ntBASIC23.58■■□□□ 1.37
CLDN1O95832 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms