Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CRLF1O75462 MIR6090-201ENST00000622481 60 ntBASIC22.06■■□□□ 1.12
CRLF1O75462 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.06■■□□□ 1.12
CRLF1O75462 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CRLF1O75462 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.05■■□□□ 1.12
CRLF1O75462 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CRLF1O75462 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.04■■□□□ 1.12
CRLF1O75462 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CRLF1O75462 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CRLF1O75462 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CRLF1O75462 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CRLF1O75462 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CRLF1O75462 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.02■■□□□ 1.12
CRLF1O75462 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CRLF1O75462 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.01■■□□□ 1.11
CRLF1O75462 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CRLF1O75462 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CRLF1O75462 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.99■■□□□ 1.11
CRLF1O75462 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CRLF1O75462 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CRLF1O75462 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CRLF1O75462 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF1O75462 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF1O75462 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CRLF1O75462 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.95■■□□□ 1.1
CRLF1O75462 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.94■■□□□ 1.1
CRLF1O75462 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF1O75462 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.94■■□□□ 1.1
CRLF1O75462 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF1O75462 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.94■■□□□ 1.1
CRLF1O75462 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CRLF1O75462 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CRLF1O75462 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF1O75462 RARRES2P2-201ENST00000394842 485 ntBASIC21.92■■□□□ 1.1
CRLF1O75462 ABHD17AP5-201ENST00000580133 923 ntBASIC21.92■■□□□ 1.1
CRLF1O75462 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF1O75462 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF1O75462 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF1O75462 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF1O75462 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.9■■□□□ 1.1
CRLF1O75462 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.9■■□□□ 1.1
CRLF1O75462 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF1O75462 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CRLF1O75462 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.87■■□□□ 1.09
CRLF1O75462 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CRLF1O75462 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.86■■□□□ 1.09
CRLF1O75462 DUX4L13-201ENST00000554103 1267 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L15-201ENST00000611059 1267 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L23-201ENST00000615195 1269 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L24-201ENST00000617576 1269 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L22-201ENST00000618238 1269 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L20-201ENST00000619712 1269 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L21-201ENST00000622058 1269 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L10-201ENST00000622460 1267 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 DUX4L25-201ENST00000624915 1269 ntBASIC21.85■■□□□ 1.09
CRLF1O75462 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CRLF1O75462 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.84■■□□□ 1.09
CRLF1O75462 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF1O75462 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CRLF1O75462 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CRLF1O75462 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRLF1O75462 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRLF1O75462 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CRLF1O75462 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.82■■□□□ 1.08
CRLF1O75462 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.82■■□□□ 1.08
CRLF1O75462 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CRLF1O75462 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRLF1O75462 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.79■■□□□ 1.08
CRLF1O75462 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.79■■□□□ 1.08
CRLF1O75462 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRLF1O75462 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CRLF1O75462 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRLF1O75462 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRLF1O75462 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.77■■□□□ 1.08
CRLF1O75462 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.77■■□□□ 1.08
CRLF1O75462 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRLF1O75462 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRLF1O75462 GPX1-201ENST00000419349 1106 ntBASIC21.75■■□□□ 1.07
CRLF1O75462 RNF126P1-201ENST00000567452 1320 ntBASIC21.75■■□□□ 1.07
CRLF1O75462 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.74■■□□□ 1.07
CRLF1O75462 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRLF1O75462 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRLF1O75462 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.73■■□□□ 1.07
CRLF1O75462 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CRLF1O75462 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CRLF1O75462 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms