Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 DUX4L11-201ENST00000611504 1267 ntBASIC38.47■■■■□ 3.75
CHD2O14647 DUX4L12-201ENST00000614593 1267 ntBASIC38.47■■■■□ 3.75
CHD2O14647 DUX4L14-201ENST00000621227 1267 ntBASIC38.47■■■■□ 3.75
CHD2O14647 LINC01971-201ENST00000617888 1048 ntBASIC38.44■■■■□ 3.74
CHD2O14647 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
CHD2O14647 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC38.41■■■■□ 3.74
CHD2O14647 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
CHD2O14647 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC38.37■■■■□ 3.73
CHD2O14647 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
CHD2O14647 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC38.36■■■■□ 3.73
CHD2O14647 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
CHD2O14647 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
CHD2O14647 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
CHD2O14647 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
CHD2O14647 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
CHD2O14647 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.33■■■■□ 3.73
CHD2O14647 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC38.33■■■■□ 3.73
CHD2O14647 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
CHD2O14647 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC38.31■■■■□ 3.72
CHD2O14647 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
CHD2O14647 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
CHD2O14647 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC38.3■■■■□ 3.72
CHD2O14647 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
CHD2O14647 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC38.29■■■■□ 3.72
CHD2O14647 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC38.29■■■■□ 3.72
CHD2O14647 ABHD17AP3-201ENST00000503096 1137 ntBASIC38.29■■■■□ 3.72
CHD2O14647 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
CHD2O14647 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC38.28■■■■□ 3.72
CHD2O14647 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
CHD2O14647 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC38.27■■■■□ 3.72
CHD2O14647 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.27■■■■□ 3.72
CHD2O14647 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC38.25■■■■□ 3.71
CHD2O14647 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
CHD2O14647 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CHD2O14647 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC38.23■■■■□ 3.71
CHD2O14647 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC38.22■■■■□ 3.71
CHD2O14647 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
CHD2O14647 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
CHD2O14647 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC38.22■■■■□ 3.71
CHD2O14647 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC38.21■■■■□ 3.71
CHD2O14647 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
CHD2O14647 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CHD2O14647 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
CHD2O14647 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC38.18■■■■□ 3.7
CHD2O14647 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
CHD2O14647 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
CHD2O14647 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC38.16■■■■□ 3.7
CHD2O14647 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC38.15■■■■□ 3.7
CHD2O14647 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CHD2O14647 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
CHD2O14647 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CHD2O14647 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC38.13■■■■□ 3.69
CHD2O14647 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC38.12■■■■□ 3.69
CHD2O14647 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC38.12■■■■□ 3.69
CHD2O14647 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC38.12■■■■□ 3.69
CHD2O14647 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC38.11■■■■□ 3.69
CHD2O14647 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.11■■■■□ 3.69
CHD2O14647 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CHD2O14647 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
CHD2O14647 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC38.07■■■■□ 3.69
CHD2O14647 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC38.07■■■■□ 3.68
CHD2O14647 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC38.07■■■■□ 3.68
CHD2O14647 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.07■■■■□ 3.68
CHD2O14647 METRNL-202ENST00000570778 967 ntTSL 5 BASIC38.05■■■■□ 3.68
CHD2O14647 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC38.05■■■■□ 3.68
CHD2O14647 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
CHD2O14647 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
CHD2O14647 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.04■■■■□ 3.68
CHD2O14647 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
CHD2O14647 DUX4L13-201ENST00000554103 1267 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L15-201ENST00000611059 1267 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L23-201ENST00000615195 1269 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L24-201ENST00000617576 1269 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L22-201ENST00000618238 1269 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L20-201ENST00000619712 1269 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L21-201ENST00000622058 1269 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L10-201ENST00000622460 1267 ntBASIC38.02■■■■□ 3.68
CHD2O14647 DUX4L25-201ENST00000624915 1269 ntBASIC38.02■■■■□ 3.68
CHD2O14647 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CHD2O14647 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC38.01■■■■□ 3.68
CHD2O14647 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC37.99■■■■□ 3.67
CHD2O14647 SRP68-213ENST00000629930 165 ntTSL 5 BASIC37.98■■■■□ 3.67
CHD2O14647 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
CHD2O14647 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC37.97■■■■□ 3.67
CHD2O14647 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
CHD2O14647 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
CHD2O14647 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
CHD2O14647 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC37.94■■■■□ 3.66
CHD2O14647 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC37.94■■■■□ 3.66
CHD2O14647 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
CHD2O14647 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC37.93■■■■□ 3.66
CHD2O14647 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC37.93■■■■□ 3.66
CHD2O14647 RARRES2P2-201ENST00000394842 485 ntBASIC37.92■■■■□ 3.66
CHD2O14647 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC37.92■■■■□ 3.66
CHD2O14647 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CHD2O14647 ABHD17AP5-201ENST00000580133 923 ntBASIC37.89■■■■□ 3.66
CHD2O14647 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC37.88■■■■□ 3.65
CHD2O14647 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC37.87■■■■□ 3.65
CHD2O14647 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
CHD2O14647 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms