Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sh2d4bA6X942 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sh2d4bA6X942 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.29■■□□□ 1.8
Sh2d4bA6X942 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sh2d4bA6X942 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
Sh2d4bA6X942 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Sh2d4bA6X942 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sh2d4bA6X942 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Sh2d4bA6X942 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Sh2d4bA6X942 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sh2d4bA6X942 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.22■■□□□ 1.79
Sh2d4bA6X942 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Sh2d4bA6X942 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Sh2d4bA6X942 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Sh2d4bA6X942 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Sh2d4bA6X942 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh2d4bA6X942 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.2■■□□□ 1.78
Sh2d4bA6X942 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Sh2d4bA6X942 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Sh2d4bA6X942 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Sh2d4bA6X942 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sh2d4bA6X942 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sh2d4bA6X942 Gm7432-201ENSMUST00000210343 879 ntBASIC26.18■■□□□ 1.78
Sh2d4bA6X942 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.18■■□□□ 1.78
Sh2d4bA6X942 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.17■■□□□ 1.78
Sh2d4bA6X942 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
Sh2d4bA6X942 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sh2d4bA6X942 Nkain2-201ENSMUST00000092602 558 ntBASIC26.17■■□□□ 1.78
Sh2d4bA6X942 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.16■■□□□ 1.78
Sh2d4bA6X942 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Sh2d4bA6X942 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sh2d4bA6X942 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Sh2d4bA6X942 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.15■■□□□ 1.78
Sh2d4bA6X942 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sh2d4bA6X942 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sh2d4bA6X942 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Sh2d4bA6X942 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sh2d4bA6X942 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh2d4bA6X942 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sh2d4bA6X942 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Sh2d4bA6X942 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sh2d4bA6X942 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sh2d4bA6X942 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sh2d4bA6X942 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sh2d4bA6X942 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sh2d4bA6X942 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sh2d4bA6X942 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sh2d4bA6X942 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.08■■□□□ 1.77
Sh2d4bA6X942 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Sh2d4bA6X942 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sh2d4bA6X942 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sh2d4bA6X942 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.07■■□□□ 1.76
Sh2d4bA6X942 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Sh2d4bA6X942 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh2d4bA6X942 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.06■■□□□ 1.76
Sh2d4bA6X942 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sh2d4bA6X942 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.04■■□□□ 1.76
Sh2d4bA6X942 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh2d4bA6X942 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Sh2d4bA6X942 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.04■■□□□ 1.76
Sh2d4bA6X942 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh2d4bA6X942 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh2d4bA6X942 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sh2d4bA6X942 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sh2d4bA6X942 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sh2d4bA6X942 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Sh2d4bA6X942 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.02■■□□□ 1.76
Sh2d4bA6X942 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.02■■□□□ 1.76
Sh2d4bA6X942 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Sh2d4bA6X942 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Sh2d4bA6X942 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sh2d4bA6X942 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26■■□□□ 1.75
Sh2d4bA6X942 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
Sh2d4bA6X942 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Sh2d4bA6X942 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sh2d4bA6X942 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sh2d4bA6X942 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Sh2d4bA6X942 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh2d4bA6X942 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh2d4bA6X942 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh2d4bA6X942 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Sh2d4bA6X942 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Sh2d4bA6X942 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sh2d4bA6X942 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Sh2d4bA6X942 Gm11599-201ENSMUST00000118720 878 ntBASIC25.95■■□□□ 1.74
Sh2d4bA6X942 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sh2d4bA6X942 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Sh2d4bA6X942 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh2d4bA6X942 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh2d4bA6X942 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sh2d4bA6X942 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sh2d4bA6X942 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sh2d4bA6X942 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh2d4bA6X942 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.91■■□□□ 1.74
Sh2d4bA6X942 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sh2d4bA6X942 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Sh2d4bA6X942 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Sh2d4bA6X942 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.9■■□□□ 1.74
Sh2d4bA6X942 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.89■■□□□ 1.74
Sh2d4bA6X942 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms