Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCOL1A6NCL2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCOL1A6NCL2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCOL1A6NCL2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCOL1A6NCL2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCOL1A6NCL2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRCOL1A6NCL2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCOL1A6NCL2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRCOL1A6NCL2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCOL1A6NCL2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRCOL1A6NCL2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCOL1A6NCL2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.68■□□□□ 0.42
LRCOL1A6NCL2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRCOL1A6NCL2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCOL1A6NCL2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRCOL1A6NCL2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCOL1A6NCL2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCOL1A6NCL2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCOL1A6NCL2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCOL1A6NCL2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCOL1A6NCL2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCOL1A6NCL2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRCOL1A6NCL2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.64■□□□□ 0.41
LRCOL1A6NCL2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.64■□□□□ 0.41
LRCOL1A6NCL2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCOL1A6NCL2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRCOL1A6NCL2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.62■□□□□ 0.41
LRCOL1A6NCL2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
LRCOL1A6NCL2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.61■□□□□ 0.41
LRCOL1A6NCL2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.61■□□□□ 0.41
LRCOL1A6NCL2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRCOL1A6NCL2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.61■□□□□ 0.41
LRCOL1A6NCL2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRCOL1A6NCL2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRCOL1A6NCL2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRCOL1A6NCL2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRCOL1A6NCL2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRCOL1A6NCL2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRCOL1A6NCL2 ABHD17AP4-201ENST00000411545 909 ntBASIC17.59■□□□□ 0.41
LRCOL1A6NCL2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.59■□□□□ 0.41
LRCOL1A6NCL2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LRCOL1A6NCL2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRCOL1A6NCL2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCOL1A6NCL2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCOL1A6NCL2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCOL1A6NCL2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCOL1A6NCL2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.56■□□□□ 0.4
LRCOL1A6NCL2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LRCOL1A6NCL2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRCOL1A6NCL2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCOL1A6NCL2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRCOL1A6NCL2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.55■□□□□ 0.4
LRCOL1A6NCL2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCOL1A6NCL2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCOL1A6NCL2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCOL1A6NCL2 AC108673.1-201ENST00000510422 1159 ntBASIC17.54■□□□□ 0.4
LRCOL1A6NCL2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 AL161658.1-201ENST00000623641 1967 ntBASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCOL1A6NCL2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LRCOL1A6NCL2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRCOL1A6NCL2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 MIR6090-201ENST00000622481 60 ntBASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRCOL1A6NCL2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRCOL1A6NCL2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCOL1A6NCL2 MIR7108-201ENST00000614319 87 ntBASIC17.49■□□□□ 0.39
LRCOL1A6NCL2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRCOL1A6NCL2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCOL1A6NCL2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.48■□□□□ 0.39
LRCOL1A6NCL2 DUX4L29-201ENST00000425409 679 ntBASIC17.48■□□□□ 0.39
LRCOL1A6NCL2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.48■□□□□ 0.39
LRCOL1A6NCL2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRCOL1A6NCL2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms