Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
DUXBA0A1W2PPF3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DUXBA0A1W2PPF3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DUXBA0A1W2PPF3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.78■■□□□ 1.08
DUXBA0A1W2PPF3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DUXBA0A1W2PPF3 AL135925.1-201ENST00000605920 1701 ntBASIC21.77■■□□□ 1.08
DUXBA0A1W2PPF3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DUXBA0A1W2PPF3 AC006077.2-201ENST00000623591 457 ntBASIC21.77■■□□□ 1.08
DUXBA0A1W2PPF3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DUXBA0A1W2PPF3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.76■■□□□ 1.07
DUXBA0A1W2PPF3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
DUXBA0A1W2PPF3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DUXBA0A1W2PPF3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.75■■□□□ 1.07
DUXBA0A1W2PPF3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.74■■□□□ 1.07
DUXBA0A1W2PPF3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DUXBA0A1W2PPF3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DUXBA0A1W2PPF3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DUXBA0A1W2PPF3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
DUXBA0A1W2PPF3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DUXBA0A1W2PPF3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.72■■□□□ 1.07
DUXBA0A1W2PPF3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
DUXBA0A1W2PPF3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DUXBA0A1W2PPF3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DUXBA0A1W2PPF3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DUXBA0A1W2PPF3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DUXBA0A1W2PPF3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DUXBA0A1W2PPF3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
DUXBA0A1W2PPF3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DUXBA0A1W2PPF3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DUXBA0A1W2PPF3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DUXBA0A1W2PPF3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.69■■□□□ 1.06
DUXBA0A1W2PPF3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DUXBA0A1W2PPF3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DUXBA0A1W2PPF3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DUXBA0A1W2PPF3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
DUXBA0A1W2PPF3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DUXBA0A1W2PPF3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.68■■□□□ 1.06
DUXBA0A1W2PPF3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DUXBA0A1W2PPF3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DUXBA0A1W2PPF3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.67■■□□□ 1.06
DUXBA0A1W2PPF3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DUXBA0A1W2PPF3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.67■■□□□ 1.06
DUXBA0A1W2PPF3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DUXBA0A1W2PPF3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
DUXBA0A1W2PPF3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DUXBA0A1W2PPF3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DUXBA0A1W2PPF3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DUXBA0A1W2PPF3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DUXBA0A1W2PPF3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DUXBA0A1W2PPF3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DUXBA0A1W2PPF3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DUXBA0A1W2PPF3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DUXBA0A1W2PPF3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DUXBA0A1W2PPF3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DUXBA0A1W2PPF3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.63■■□□□ 1.05
DUXBA0A1W2PPF3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DUXBA0A1W2PPF3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DUXBA0A1W2PPF3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DUXBA0A1W2PPF3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DUXBA0A1W2PPF3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DUXBA0A1W2PPF3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DUXBA0A1W2PPF3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
DUXBA0A1W2PPF3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DUXBA0A1W2PPF3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.59■■□□□ 1.05
DUXBA0A1W2PPF3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DUXBA0A1W2PPF3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DUXBA0A1W2PPF3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DUXBA0A1W2PPF3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DUXBA0A1W2PPF3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.58■■□□□ 1.05
DUXBA0A1W2PPF3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DUXBA0A1W2PPF3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
DUXBA0A1W2PPF3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DUXBA0A1W2PPF3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUXBA0A1W2PPF3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUXBA0A1W2PPF3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
DUXBA0A1W2PPF3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUXBA0A1W2PPF3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUXBA0A1W2PPF3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUXBA0A1W2PPF3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DUXBA0A1W2PPF3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUXBA0A1W2PPF3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUXBA0A1W2PPF3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUXBA0A1W2PPF3 AL139393.2-201ENST00000608721 2025 ntBASIC21.53■■□□□ 1.04
DUXBA0A1W2PPF3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DUXBA0A1W2PPF3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUXBA0A1W2PPF3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUXBA0A1W2PPF3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
DUXBA0A1W2PPF3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.49■■□□□ 1.03
DUXBA0A1W2PPF3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.49■■□□□ 1.03
DUXBA0A1W2PPF3 ZNRF2P1-201ENST00000441407 443 ntBASIC21.49■■□□□ 1.03
DUXBA0A1W2PPF3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DUXBA0A1W2PPF3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.48■■□□□ 1.03
DUXBA0A1W2PPF3 DRD5P2-201ENST00000421395 2012 ntBASIC21.48■■□□□ 1.03
DUXBA0A1W2PPF3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DUXBA0A1W2PPF3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DUXBA0A1W2PPF3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DUXBA0A1W2PPF3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DUXBA0A1W2PPF3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DUXBA0A1W2PPF3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
DUXBA0A1W2PPF3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms