Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-7A0A0C4DH55 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-7A0A0C4DH55 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.76■□□□□ 0.27
IGKV3D-7A0A0C4DH55 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-7A0A0C4DH55 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-7A0A0C4DH55 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-7A0A0C4DH55 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
IGKV3D-7A0A0C4DH55 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
IGKV3D-7A0A0C4DH55 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-7A0A0C4DH55 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-7A0A0C4DH55 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-7A0A0C4DH55 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-7A0A0C4DH55 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-7A0A0C4DH55 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-7A0A0C4DH55 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
IGKV3D-7A0A0C4DH55 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-7A0A0C4DH55 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC16.71■□□□□ 0.27
IGKV3D-7A0A0C4DH55 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-7A0A0C4DH55 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-7A0A0C4DH55 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-7A0A0C4DH55 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-7A0A0C4DH55 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-7A0A0C4DH55 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-7A0A0C4DH55 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-7A0A0C4DH55 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
IGKV3D-7A0A0C4DH55 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-7A0A0C4DH55 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
IGKV3D-7A0A0C4DH55 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-7A0A0C4DH55 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
IGKV3D-7A0A0C4DH55 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-7A0A0C4DH55 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.67■□□□□ 0.26
IGKV3D-7A0A0C4DH55 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-7A0A0C4DH55 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-7A0A0C4DH55 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
IGKV3D-7A0A0C4DH55 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.66■□□□□ 0.26
IGKV3D-7A0A0C4DH55 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-7A0A0C4DH55 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.65■□□□□ 0.26
IGKV3D-7A0A0C4DH55 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-7A0A0C4DH55 AC142086.6-201ENST00000621154 1765 ntBASIC16.65■□□□□ 0.26
IGKV3D-7A0A0C4DH55 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
IGKV3D-7A0A0C4DH55 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-7A0A0C4DH55 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-7A0A0C4DH55 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-7A0A0C4DH55 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV3D-7A0A0C4DH55 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-7A0A0C4DH55 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-7A0A0C4DH55 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-7A0A0C4DH55 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV3D-7A0A0C4DH55 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-7A0A0C4DH55 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV3D-7A0A0C4DH55 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.6■□□□□ 0.25
IGKV3D-7A0A0C4DH55 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV3D-7A0A0C4DH55 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV3D-7A0A0C4DH55 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IGKV3D-7A0A0C4DH55 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV3D-7A0A0C4DH55 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
IGKV3D-7A0A0C4DH55 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
IGKV3D-7A0A0C4DH55 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IGKV3D-7A0A0C4DH55 AL121749.1-202ENST00000609313 2153 ntBASIC16.55■□□□□ 0.24
IGKV3D-7A0A0C4DH55 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV3D-7A0A0C4DH55 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV3D-7A0A0C4DH55 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV3D-7A0A0C4DH55 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV3D-7A0A0C4DH55 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms