Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
IGKV3D-20A0A0C4DH25 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
IGKV3D-20A0A0C4DH25 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV3D-20A0A0C4DH25 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
IGKV3D-20A0A0C4DH25 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
IGKV3D-20A0A0C4DH25 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV3D-20A0A0C4DH25 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV3D-20A0A0C4DH25 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.73■□□□□ 0.75
IGKV3D-20A0A0C4DH25 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV3D-20A0A0C4DH25 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
IGKV3D-20A0A0C4DH25 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV3D-20A0A0C4DH25 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
IGKV3D-20A0A0C4DH25 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV3D-20A0A0C4DH25 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
IGKV3D-20A0A0C4DH25 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV3D-20A0A0C4DH25 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV3D-20A0A0C4DH25 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV3D-20A0A0C4DH25 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
IGKV3D-20A0A0C4DH25 AL031258.1-201ENST00000623562 325 ntBASIC19.7■□□□□ 0.74
IGKV3D-20A0A0C4DH25 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV3D-20A0A0C4DH25 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.7■□□□□ 0.74
IGKV3D-20A0A0C4DH25 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV3D-20A0A0C4DH25 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV3D-20A0A0C4DH25 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.68■□□□□ 0.74
IGKV3D-20A0A0C4DH25 AL135925.1-201ENST00000605920 1701 ntBASIC19.68■□□□□ 0.74
IGKV3D-20A0A0C4DH25 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
IGKV3D-20A0A0C4DH25 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IGKV3D-20A0A0C4DH25 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV3D-20A0A0C4DH25 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV3D-20A0A0C4DH25 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IGKV3D-20A0A0C4DH25 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
IGKV3D-20A0A0C4DH25 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.64■□□□□ 0.73
IGKV3D-20A0A0C4DH25 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV3D-20A0A0C4DH25 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV3D-20A0A0C4DH25 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV3D-20A0A0C4DH25 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV3D-20A0A0C4DH25 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGKV3D-20A0A0C4DH25 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
IGKV3D-20A0A0C4DH25 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.62■□□□□ 0.73
IGKV3D-20A0A0C4DH25 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV3D-20A0A0C4DH25 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV3D-20A0A0C4DH25 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IGKV3D-20A0A0C4DH25 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV3D-20A0A0C4DH25 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV3D-20A0A0C4DH25 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV3D-20A0A0C4DH25 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV3D-20A0A0C4DH25 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
IGKV3D-20A0A0C4DH25 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.59■□□□□ 0.73
IGKV3D-20A0A0C4DH25 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV3D-20A0A0C4DH25 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.58■□□□□ 0.73
IGKV3D-20A0A0C4DH25 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IGKV3D-20A0A0C4DH25 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV3D-20A0A0C4DH25 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
IGKV3D-20A0A0C4DH25 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV3D-20A0A0C4DH25 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV3D-20A0A0C4DH25 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV3D-20A0A0C4DH25 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV3D-20A0A0C4DH25 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.56■□□□□ 0.72
IGKV3D-20A0A0C4DH25 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.56■□□□□ 0.72
IGKV3D-20A0A0C4DH25 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
IGKV3D-20A0A0C4DH25 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV3D-20A0A0C4DH25 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IGKV3D-20A0A0C4DH25 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV3D-20A0A0C4DH25 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV3D-20A0A0C4DH25 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV3D-20A0A0C4DH25 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IGKV3D-20A0A0C4DH25 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGKV3D-20A0A0C4DH25 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGKV3D-20A0A0C4DH25 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV3D-20A0A0C4DH25 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV3D-20A0A0C4DH25 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV3D-20A0A0C4DH25 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.52■□□□□ 0.72
IGKV3D-20A0A0C4DH25 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV3D-20A0A0C4DH25 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV3D-20A0A0C4DH25 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.51■□□□□ 0.71
IGKV3D-20A0A0C4DH25 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
IGKV3D-20A0A0C4DH25 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV3D-20A0A0C4DH25 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV3D-20A0A0C4DH25 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.51■□□□□ 0.71
IGKV3D-20A0A0C4DH25 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 AC142086.6-201ENST00000621154 1765 ntBASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.5■□□□□ 0.71
IGKV3D-20A0A0C4DH25 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV3D-20A0A0C4DH25 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
IGKV3D-20A0A0C4DH25 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV3D-20A0A0C4DH25 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV3D-20A0A0C4DH25 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV3D-20A0A0C4DH25 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.49■□□□□ 0.71
IGKV3D-20A0A0C4DH25 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV3D-20A0A0C4DH25 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV3D-20A0A0C4DH25 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
IGKV3D-20A0A0C4DH25 AP002365.1-201ENST00000603448 772 ntBASIC19.47■□□□□ 0.71
IGKV3D-20A0A0C4DH25 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV3D-20A0A0C4DH25 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV3D-20A0A0C4DH25 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms