Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 SNAI3-AS1-204ENST00000567997 2048 ntBASIC15.19■□□□□ 0.02
TRAV22A0A0B4J277 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV22A0A0B4J277 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV22A0A0B4J277 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV22A0A0B4J277 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV22A0A0B4J277 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV22A0A0B4J277 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV22A0A0B4J277 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV22A0A0B4J277 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV22A0A0B4J277 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV22A0A0B4J277 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV22A0A0B4J277 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV22A0A0B4J277 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV22A0A0B4J277 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV22A0A0B4J277 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV22A0A0B4J277 AC142086.6-201ENST00000621154 1765 ntBASIC15.16■□□□□ 0.02
TRAV22A0A0B4J277 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV22A0A0B4J277 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV22A0A0B4J277 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV22A0A0B4J277 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV22A0A0B4J277 AC120057.4-201ENST00000624722 1615 ntBASIC15.14■□□□□ 0.01
TRAV22A0A0B4J277 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV22A0A0B4J277 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV22A0A0B4J277 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV22A0A0B4J277 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV22A0A0B4J277 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV22A0A0B4J277 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV22A0A0B4J277 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV22A0A0B4J277 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV22A0A0B4J277 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV22A0A0B4J277 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV22A0A0B4J277 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV22A0A0B4J277 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV22A0A0B4J277 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV22A0A0B4J277 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV22A0A0B4J277 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV22A0A0B4J277 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV22A0A0B4J277 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV22A0A0B4J277 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV22A0A0B4J277 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV22A0A0B4J277 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV22A0A0B4J277 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV22A0A0B4J277 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV22A0A0B4J277 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV22A0A0B4J277 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV22A0A0B4J277 PKM-204ENST00000449901 2526 ntTSL 2 BASIC15.07■□□□□ 0
TRAV22A0A0B4J277 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV22A0A0B4J277 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV22A0A0B4J277 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV22A0A0B4J277 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV22A0A0B4J277 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV22A0A0B4J277 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV22A0A0B4J277 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV22A0A0B4J277 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV22A0A0B4J277 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV22A0A0B4J277 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV22A0A0B4J277 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV22A0A0B4J277 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV22A0A0B4J277 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV22A0A0B4J277 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV22A0A0B4J277 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC15.03■□□□□ -0
TRAV22A0A0B4J277 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV22A0A0B4J277 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV22A0A0B4J277 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV22A0A0B4J277 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV22A0A0B4J277 AL121749.1-202ENST00000609313 2153 ntBASIC15□□□□□ -0.01
TRAV22A0A0B4J277 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV22A0A0B4J277 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV22A0A0B4J277 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV22A0A0B4J277 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV22A0A0B4J277 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV22A0A0B4J277 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV22A0A0B4J277 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV22A0A0B4J277 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV22A0A0B4J277 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV22A0A0B4J277 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV22A0A0B4J277 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV22A0A0B4J277 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV22A0A0B4J277 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV22A0A0B4J277 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV22A0A0B4J277 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV22A0A0B4J277 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV22A0A0B4J277 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV22A0A0B4J277 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAV22A0A0B4J277 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV22A0A0B4J277 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV22A0A0B4J277 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms