Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV9-1A0A075B6T8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV9-1A0A075B6T8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV9-1A0A075B6T8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRAV9-1A0A075B6T8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV9-1A0A075B6T8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV9-1A0A075B6T8 AL121749.1-202ENST00000609313 2153 ntBASIC20.25■□□□□ 0.83
TRAV9-1A0A075B6T8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV9-1A0A075B6T8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAV9-1A0A075B6T8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV9-1A0A075B6T8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV9-1A0A075B6T8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV9-1A0A075B6T8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV9-1A0A075B6T8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV9-1A0A075B6T8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAV9-1A0A075B6T8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV9-1A0A075B6T8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV9-1A0A075B6T8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV9-1A0A075B6T8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV9-1A0A075B6T8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV9-1A0A075B6T8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAV9-1A0A075B6T8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV9-1A0A075B6T8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV9-1A0A075B6T8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV9-1A0A075B6T8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV9-1A0A075B6T8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAV9-1A0A075B6T8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV9-1A0A075B6T8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV9-1A0A075B6T8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV9-1A0A075B6T8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV9-1A0A075B6T8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV9-1A0A075B6T8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV9-1A0A075B6T8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TRAV9-1A0A075B6T8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV9-1A0A075B6T8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV9-1A0A075B6T8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV9-1A0A075B6T8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV9-1A0A075B6T8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRAV9-1A0A075B6T8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV9-1A0A075B6T8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV9-1A0A075B6T8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV9-1A0A075B6T8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV9-1A0A075B6T8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV9-1A0A075B6T8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV9-1A0A075B6T8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRAV9-1A0A075B6T8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV9-1A0A075B6T8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV9-1A0A075B6T8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRAV9-1A0A075B6T8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV9-1A0A075B6T8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV9-1A0A075B6T8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV9-1A0A075B6T8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV9-1A0A075B6T8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV9-1A0A075B6T8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV9-1A0A075B6T8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.08■□□□□ 0.81
TRAV9-1A0A075B6T8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV9-1A0A075B6T8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
TRAV9-1A0A075B6T8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV9-1A0A075B6T8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV9-1A0A075B6T8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRAV9-1A0A075B6T8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRAV9-1A0A075B6T8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV9-1A0A075B6T8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV9-1A0A075B6T8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV9-1A0A075B6T8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV9-1A0A075B6T8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV9-1A0A075B6T8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV9-1A0A075B6T8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV9-1A0A075B6T8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV9-1A0A075B6T8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV9-1A0A075B6T8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV9-1A0A075B6T8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV9-1A0A075B6T8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV9-1A0A075B6T8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV9-1A0A075B6T8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV9-1A0A075B6T8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV9-1A0A075B6T8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV9-1A0A075B6T8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV9-1A0A075B6T8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV9-1A0A075B6T8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV9-1A0A075B6T8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV9-1A0A075B6T8 DRD5P2-201ENST00000421395 2012 ntBASIC19.96■□□□□ 0.79
TRAV9-1A0A075B6T8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV9-1A0A075B6T8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV9-1A0A075B6T8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV9-1A0A075B6T8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV9-1A0A075B6T8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV9-1A0A075B6T8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV9-1A0A075B6T8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV9-1A0A075B6T8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV9-1A0A075B6T8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV9-1A0A075B6T8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV9-1A0A075B6T8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV9-1A0A075B6T8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRAV9-1A0A075B6T8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms