Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA9Q9Y5G4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 MKRN4P-201ENST00000444706 1521 ntBASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA9Q9Y5G4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 MIPEPP3-201ENST00000412105 444 ntBASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 AL512625.2-201ENST00000417533 625 ntBASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 ITM2C-210ENST00000620962 501 ntBASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA9Q9Y5G4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 AC008694.1-202ENST00000636953 945 ntBASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA9Q9Y5G4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 AC242852.2-201ENST00000615738 1807 ntBASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 AC069236.1-201ENST00000604339 616 ntBASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 AC092118.2-201ENST00000613495 667 ntBASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 AP006587.3-201ENST00000525742 1516 ntBASIC19.61■□□□□ 0.73
PCDHGA9Q9Y5G4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA9Q9Y5G4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA9Q9Y5G4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA9Q9Y5G4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms