Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 AC011767.1-201ENST00000617410 1153 ntBASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 CLDN5-201ENST00000403084 2357 ntBASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 NCF1B-203ENST00000435988 1254 ntBASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB1Q9Y5F3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.02■□□□□ 0.95
PCDHB1Q9Y5F3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB1Q9Y5F3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB1Q9Y5F3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB1Q9Y5F3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 PKD1P6-201ENST00000343738 4769 ntBASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 Z98882.1-201ENST00000622160 2253 ntBASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB1Q9Y5F3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PCDHB1Q9Y5F3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB1Q9Y5F3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms