Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB13Q9Y5F0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 AC104187.1-201ENST00000607510 612 ntBASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB13Q9Y5F0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 AC008175.2-201ENST00000612840 297 ntBASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB13Q9Y5F0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 NTF6G-201ENST00000591094 616 ntBASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB13Q9Y5F0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 KRT19P1-201ENST00000405746 1186 ntBASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 POU5F1P4-201ENST00000413175 1085 ntBASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHB13Q9Y5F0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 AC010141.2-201ENST00000452426 721 ntBASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 AP001160.3-201ENST00000601484 763 ntBASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 MIR5787-201ENST00000611784 55 ntBASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDHB13Q9Y5F0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB13Q9Y5F0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB13Q9Y5F0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.14■■□□□ 1.3
PCDHB13Q9Y5F0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB13Q9Y5F0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
PCDHB13Q9Y5F0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
PCDHB13Q9Y5F0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHB13Q9Y5F0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
PCDHB13Q9Y5F0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHB13Q9Y5F0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB13Q9Y5F0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB13Q9Y5F0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 MIR935-201ENST00000401179 91 ntBASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB13Q9Y5F0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB13Q9Y5F0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms