Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 AC133561.4-201ENST00000566112 224 ntBASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF6Q9Y4K3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF6Q9Y4K3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 AC006128.1-201ENST00000624704 1661 ntBASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 BX842568.3-201ENST00000418104 571 ntBASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 PLK5-205ENST00000642079 1969 ntBASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAF6Q9Y4K3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAF6Q9Y4K3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF6Q9Y4K3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAF6Q9Y4K3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TRAF6Q9Y4K3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF6Q9Y4K3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF6Q9Y4K3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF6Q9Y4K3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 RNF165-205ENST00000588679 2904 ntBASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TRAF6Q9Y4K3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms