Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 SERBP1P1-201ENST00000396021 1160 ntBASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 AC010525.1-201ENST00000585559 441 ntBASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGB4Q9UN71 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 Z98882.1-201ENST00000622160 2253 ntBASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 AL034346.1-201ENST00000568244 1277 ntBASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 MIR4466-201ENST00000606121 54 ntBASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 AC011298.3-201ENST00000615796 283 ntBASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB4Q9UN71 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGB4Q9UN71 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHGB4Q9UN71 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGB4Q9UN71 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGB4Q9UN71 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 AC136469.2-201ENST00000623944 1028 ntBASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB4Q9UN71 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB4Q9UN71 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 AP005435.1-201ENST00000529293 1178 ntBASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGB4Q9UN71 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms