Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 AC005229.4-201ENST00000610085 2198 ntBASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 AL049796.1-201ENST00000565336 1766 ntBASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 AC026271.2-201ENST00000428091 497 ntBASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 AC034268.1-201ENST00000441047 882 ntBASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 KRT18P61-201ENST00000585825 1298 ntBASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC3Q9UN70 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 AC087623.3-201ENST00000607047 1098 ntBASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC3Q9UN70 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC3Q9UN70 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 RARRES2P6-201ENST00000567333 442 ntBASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 AP001160.3-201ENST00000601484 763 ntBASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGC3Q9UN70 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
PCDHGC3Q9UN70 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHGC3Q9UN70 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 KRT18P20-201ENST00000548986 1279 ntBASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC3Q9UN70 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 KRT16P2-201ENST00000414673 1423 ntBASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC3Q9UN70 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms