Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 AC105233.4-201ENST00000642045 216 ntBASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAP1Q9NZP6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAP1Q9NZP6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 AC068587.7-201ENST00000641602 218 ntBASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAP1Q9NZP6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAP1Q9NZP6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAP1Q9NZP6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.02■□□□□ 0.63
NPAP1Q9NZP6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.02■□□□□ 0.63
NPAP1Q9NZP6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NPAP1Q9NZP6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAP1Q9NZP6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 AC092666.2-201ENST00000613287 246 ntBASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAP1Q9NZP6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 AC123595.1-201ENST00000440769 1046 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 AC010141.3-201ENST00000456659 717 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L2-201ENST00000561772 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 AC104564.3-201ENST00000582367 638 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L6-201ENST00000626483 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L1-201ENST00000627662 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L8-201ENST00000629013 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L3-201ENST00000630187 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L7-201ENST00000630678 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 DUX4L5-201ENST00000630834 1275 ntBASIC19■□□□□ 0.63
NPAP1Q9NZP6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19■□□□□ 0.63
NPAP1Q9NZP6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms