Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 AC244015.2-201ENST00000616358 1861 ntBASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE1Q9NRR8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CDC42SE1Q9NRR8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.89□□□□□ -0.67
CDC42SE1Q9NRR8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 AL391005.1-201ENST00000623953 2435 ntBASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 HLA-L-211ENST00000482052 1765 ntBASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 AC141586.5-201ENST00000624546 2050 ntBASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 OR6D1P-202ENST00000641007 5290 ntBASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE1Q9NRR8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms