Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD248Q9HCU0 KRT19P1-201ENST00000405746 1186 ntBASIC21.97■■□□□ 1.11
CD248Q9HCU0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.97■■□□□ 1.11
CD248Q9HCU0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.97■■□□□ 1.11
CD248Q9HCU0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.97■■□□□ 1.11
CD248Q9HCU0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD248Q9HCU0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD248Q9HCU0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD248Q9HCU0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD248Q9HCU0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD248Q9HCU0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD248Q9HCU0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD248Q9HCU0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD248Q9HCU0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD248Q9HCU0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD248Q9HCU0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.96■■□□□ 1.11
CD248Q9HCU0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.95■■□□□ 1.1
CD248Q9HCU0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD248Q9HCU0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.94■■□□□ 1.1
CD248Q9HCU0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CD248Q9HCU0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CD248Q9HCU0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD248Q9HCU0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CD248Q9HCU0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.94■■□□□ 1.1
CD248Q9HCU0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 CROCCP5-201ENST00000436658 830 ntBASIC21.93■■□□□ 1.1
CD248Q9HCU0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.93■■□□□ 1.1
CD248Q9HCU0 AC026185.1-201ENST00000445748 174 ntBASIC21.93■■□□□ 1.1
CD248Q9HCU0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD248Q9HCU0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CD248Q9HCU0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
CD248Q9HCU0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 AC092068.2-201ENST00000590491 1708 ntBASIC21.92■■□□□ 1.1
CD248Q9HCU0 AC005224.4-201ENST00000583262 1652 ntBASIC21.92■■□□□ 1.1
CD248Q9HCU0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.92■■□□□ 1.1
CD248Q9HCU0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.92■■□□□ 1.1
CD248Q9HCU0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 AC079140.4-201ENST00000507448 529 ntBASIC21.92■■□□□ 1.1
CD248Q9HCU0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.92■■□□□ 1.1
CD248Q9HCU0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.92■■□□□ 1.1
CD248Q9HCU0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CD248Q9HCU0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms