Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRRC40Q9H9A6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.33■■□□□ 1
LRRC40Q9H9A6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRRC40Q9H9A6 AL049796.1-201ENST00000565336 1766 ntBASIC21.33■■□□□ 1
LRRC40Q9H9A6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LRRC40Q9H9A6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LRRC40Q9H9A6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.32■■□□□ 1
LRRC40Q9H9A6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LRRC40Q9H9A6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRC40Q9H9A6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.31■■□□□ 1
LRRC40Q9H9A6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.31■■□□□ 1
LRRC40Q9H9A6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.31■■□□□ 1
LRRC40Q9H9A6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LRRC40Q9H9A6 EEF1DP3-203ENST00000566025 782 ntBASIC21.31■■□□□ 1
LRRC40Q9H9A6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.31■■□□□ 1
LRRC40Q9H9A6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.31■■□□□ 1
LRRC40Q9H9A6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC40Q9H9A6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.3■■□□□ 1
LRRC40Q9H9A6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.3■■□□□ 1
LRRC40Q9H9A6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.3■■□□□ 1
LRRC40Q9H9A6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 AC027612.3-201ENST00000413684 1047 ntBASIC21.3■■□□□ 1
LRRC40Q9H9A6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.3■■□□□ 1
LRRC40Q9H9A6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.3■■□□□ 1
LRRC40Q9H9A6 AC053503.5-201ENST00000601508 636 ntBASIC21.3■■□□□ 1
LRRC40Q9H9A6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.3■■□□□ 1
LRRC40Q9H9A6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRRC40Q9H9A6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.29■■□□□ 1
LRRC40Q9H9A6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
LRRC40Q9H9A6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRRC40Q9H9A6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
LRRC40Q9H9A6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.29■■□□□ 1
LRRC40Q9H9A6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC40Q9H9A6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC40Q9H9A6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC40Q9H9A6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC40Q9H9A6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC40Q9H9A6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC40Q9H9A6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC40Q9H9A6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.28■■□□□ 1
LRRC40Q9H9A6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC40Q9H9A6 AC079140.4-201ENST00000507448 529 ntBASIC21.27■■□□□ 1
LRRC40Q9H9A6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LRRC40Q9H9A6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms