Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 AC139795.1-202ENST00000500444 432 ntBASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 KRT18P24-201ENST00000344739 1156 ntBASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MAP1LC3AQ9H492 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 SNX5-217ENST00000606557 1087 ntBASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 MIR7108-201ENST00000614319 87 ntBASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 AC005703.6-201ENST00000623265 1329 ntBASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MAP1LC3AQ9H492 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.29■□□□□ 0.04
MAP1LC3AQ9H492 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 AC006128.1-201ENST00000624704 1661 ntBASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 AC073314.1-201ENST00000568729 2216 ntBASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MAP1LC3AQ9H492 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms