Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCX3BQ9H321 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.02■□□□□ 0.8
VCX3BQ9H321 MIR3648-2-201ENST00000581792 180 ntBASIC20.02■□□□□ 0.8
VCX3BQ9H321 MIR3648-1-201ENST00000615959 180 ntBASIC20.02■□□□□ 0.8
VCX3BQ9H321 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCX3BQ9H321 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCX3BQ9H321 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.02■□□□□ 0.8
VCX3BQ9H321 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
VCX3BQ9H321 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
VCX3BQ9H321 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
VCX3BQ9H321 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VCX3BQ9H321 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
VCX3BQ9H321 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 LETM1P2-201ENST00000597330 2178 ntBASIC20.01■□□□□ 0.79
VCX3BQ9H321 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 ZNRF2P2-203ENST00000454624 420 ntBASIC20.01■□□□□ 0.79
VCX3BQ9H321 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.01■□□□□ 0.79
VCX3BQ9H321 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCX3BQ9H321 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3BQ9H321 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20■□□□□ 0.79
VCX3BQ9H321 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
VCX3BQ9H321 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20■□□□□ 0.79
VCX3BQ9H321 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 PCDHAC2-203ENST00000615316 3011 ntBASIC20■□□□□ 0.79
VCX3BQ9H321 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
VCX3BQ9H321 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3BQ9H321 AC006128.1-201ENST00000624704 1661 ntBASIC20■□□□□ 0.79
VCX3BQ9H321 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VCX3BQ9H321 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.99■□□□□ 0.79
VCX3BQ9H321 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
VCX3BQ9H321 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.99■□□□□ 0.79
VCX3BQ9H321 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
VCX3BQ9H321 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.99■□□□□ 0.79
VCX3BQ9H321 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.99■□□□□ 0.79
VCX3BQ9H321 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3BQ9H321 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3BQ9H321 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
VCX3BQ9H321 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 AC022413.1-201ENST00000624602 984 ntBASIC19.97■□□□□ 0.79
VCX3BQ9H321 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3BQ9H321 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.97■□□□□ 0.79
VCX3BQ9H321 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms