Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PKP2Q99959 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP2Q99959 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP2Q99959 AL499627.2-201ENST00000606283 725 ntBASIC19.76■□□□□ 0.75
PKP2Q99959 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
PKP2Q99959 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP2Q99959 AC020907.5-201ENST00000624372 1936 ntBASIC19.76■□□□□ 0.75
PKP2Q99959 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.75■□□□□ 0.75
PKP2Q99959 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PKP2Q99959 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKP2Q99959 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP2Q99959 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP2Q99959 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP2Q99959 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP2Q99959 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PKP2Q99959 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.75■□□□□ 0.75
PKP2Q99959 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP2Q99959 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP2Q99959 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP2Q99959 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP2Q99959 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PKP2Q99959 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP2Q99959 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP2Q99959 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKP2Q99959 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP2Q99959 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP2Q99959 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP2Q99959 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP2Q99959 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PKP2Q99959 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP2Q99959 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PKP2Q99959 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
PKP2Q99959 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PKP2Q99959 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PKP2Q99959 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PKP2Q99959 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP2Q99959 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP2Q99959 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP2Q99959 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PKP2Q99959 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP2Q99959 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP2Q99959 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 AC003102.1-202ENST00000563394 1796 ntBASIC19.72■□□□□ 0.75
PKP2Q99959 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP2Q99959 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PKP2Q99959 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP2Q99959 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PKP2Q99959 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
PKP2Q99959 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP2Q99959 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms