Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.32■□□□□ 0.04
MUC4Q99102 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.32■□□□□ 0.04
MUC4Q99102 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.32■□□□□ 0.04
MUC4Q99102 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 MIR939-201ENST00000401314 82 ntBASIC15.32■□□□□ 0.04
MUC4Q99102 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.31■□□□□ 0.04
MUC4Q99102 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MUC4Q99102 AC099791.1-201ENST00000416440 715 ntBASIC15.31■□□□□ 0.04
MUC4Q99102 AC027682.1-201ENST00000562846 899 ntBASIC15.31■□□□□ 0.04
MUC4Q99102 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.31■□□□□ 0.04
MUC4Q99102 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.31■□□□□ 0.04
MUC4Q99102 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.31■□□□□ 0.04
MUC4Q99102 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.31■□□□□ 0.04
MUC4Q99102 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MUC4Q99102 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.31■□□□□ 0.04
MUC4Q99102 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 OXCT2P1-201ENST00000447263 1535 ntBASIC15.31■□□□□ 0.04
MUC4Q99102 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.31■□□□□ 0.04
MUC4Q99102 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.31■□□□□ 0.04
MUC4Q99102 AL355001.2-201ENST00000620617 1191 ntBASIC15.31■□□□□ 0.04
MUC4Q99102 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MUC4Q99102 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MUC4Q99102 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.3■□□□□ 0.04
MUC4Q99102 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 IGHV3-19-201ENST00000521488 291 ntBASIC15.3■□□□□ 0.04
MUC4Q99102 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.3■□□□□ 0.04
MUC4Q99102 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.3■□□□□ 0.04
MUC4Q99102 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MUC4Q99102 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MUC4Q99102 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.29■□□□□ 0.04
MUC4Q99102 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.29■□□□□ 0.04
MUC4Q99102 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 AC092667.1-201ENST00000434301 2586 ntBASIC15.29■□□□□ 0.04
MUC4Q99102 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.29■□□□□ 0.04
MUC4Q99102 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 MIR572-201ENST00000384983 95 ntBASIC15.29■□□□□ 0.04
MUC4Q99102 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MUC4Q99102 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.29■□□□□ 0.04
MUC4Q99102 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MUC4Q99102 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MUC4Q99102 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MUC4Q99102 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.28■□□□□ 0.04
MUC4Q99102 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MUC4Q99102 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MUC4Q99102 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.28■□□□□ 0.04
MUC4Q99102 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MUC4Q99102 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MUC4Q99102 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms