Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SPENQ96T58 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPENQ96T58 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPENQ96T58 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.11■□□□□ 0.65
SPENQ96T58 C1orf229-201ENST00000623686 2258 ntBASIC19.11■□□□□ 0.65
SPENQ96T58 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.11■□□□□ 0.65
SPENQ96T58 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.11■□□□□ 0.65
SPENQ96T58 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.11■□□□□ 0.65
SPENQ96T58 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.11■□□□□ 0.65
SPENQ96T58 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SPENQ96T58 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
SPENQ96T58 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.11■□□□□ 0.65
SPENQ96T58 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SPENQ96T58 BX088651.1-201ENST00000540551 451 ntBASIC19.11■□□□□ 0.65
SPENQ96T58 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.11■□□□□ 0.65
SPENQ96T58 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPENQ96T58 SNORA78-201ENST00000459373 127 ntBASIC19.1■□□□□ 0.65
SPENQ96T58 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.1■□□□□ 0.65
SPENQ96T58 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPENQ96T58 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
SPENQ96T58 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SPENQ96T58 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPENQ96T58 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPENQ96T58 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPENQ96T58 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.1■□□□□ 0.65
SPENQ96T58 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPENQ96T58 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SPENQ96T58 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.1■□□□□ 0.65
SPENQ96T58 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.1■□□□□ 0.65
SPENQ96T58 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.1■□□□□ 0.65
SPENQ96T58 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.1■□□□□ 0.65
SPENQ96T58 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPENQ96T58 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.1■□□□□ 0.65
SPENQ96T58 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.09■□□□□ 0.65
SPENQ96T58 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SPENQ96T58 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SPENQ96T58 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.09■□□□□ 0.65
SPENQ96T58 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.09■□□□□ 0.65
SPENQ96T58 AL359736.2-201ENST00000621992 437 ntBASIC19.09■□□□□ 0.65
SPENQ96T58 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 Z99916.2-201ENST00000604037 246 ntBASIC19.09■□□□□ 0.65
SPENQ96T58 AC012306.2-201ENST00000609350 630 ntBASIC19.09■□□□□ 0.65
SPENQ96T58 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SPENQ96T58 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.09■□□□□ 0.65
SPENQ96T58 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPENQ96T58 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.09■□□□□ 0.65
SPENQ96T58 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.09■□□□□ 0.65
SPENQ96T58 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.09■□□□□ 0.65
SPENQ96T58 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.09■□□□□ 0.65
SPENQ96T58 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SPENQ96T58 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPENQ96T58 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.08■□□□□ 0.65
SPENQ96T58 AC097658.1-201ENST00000475555 843 ntBASIC19.08■□□□□ 0.65
SPENQ96T58 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SPENQ96T58 AC069236.1-201ENST00000604339 616 ntBASIC19.08■□□□□ 0.65
SPENQ96T58 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.08■□□□□ 0.65
SPENQ96T58 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPENQ96T58 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SPENQ96T58 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SPENQ96T58 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPENQ96T58 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPENQ96T58 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.08■□□□□ 0.64
SPENQ96T58 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPENQ96T58 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SPENQ96T58 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.08■□□□□ 0.64
SPENQ96T58 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPENQ96T58 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPENQ96T58 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.08■□□□□ 0.64
SPENQ96T58 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPENQ96T58 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.08■□□□□ 0.64
SPENQ96T58 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
SPENQ96T58 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 AL355472.2-201ENST00000422958 438 ntBASIC19.07■□□□□ 0.64
SPENQ96T58 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.07■□□□□ 0.64
SPENQ96T58 C1QBPP2-201ENST00000528754 825 ntBASIC19.07■□□□□ 0.64
SPENQ96T58 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.07■□□□□ 0.64
SPENQ96T58 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.07■□□□□ 0.64
SPENQ96T58 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.07■□□□□ 0.64
SPENQ96T58 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.07■□□□□ 0.64
SPENQ96T58 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.07■□□□□ 0.64
SPENQ96T58 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.07■□□□□ 0.64
SPENQ96T58 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.07■□□□□ 0.64
SPENQ96T58 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.07■□□□□ 0.64
SPENQ96T58 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SPENQ96T58 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPENQ96T58 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms