Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MTDHP2-201ENST00000601468 714 ntBASIC17.02■□□□□ 0.32
RAB40CQ96S21 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RAB40CQ96S21 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 AC239859.2-201ENST00000444165 318 ntBASIC17.01■□□□□ 0.31
RAB40CQ96S21 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAB40CQ96S21 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40CQ96S21 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40CQ96S21 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RAB40CQ96S21 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAB40CQ96S21 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40CQ96S21 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB40CQ96S21 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB40CQ96S21 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB40CQ96S21 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RAB40CQ96S21 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17■□□□□ 0.31
RAB40CQ96S21 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 AC073314.1-201ENST00000568729 2216 ntBASIC17■□□□□ 0.31
RAB40CQ96S21 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17■□□□□ 0.31
RAB40CQ96S21 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40CQ96S21 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17■□□□□ 0.31
RAB40CQ96S21 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 AC003102.1-202ENST00000563394 1796 ntBASIC16.99■□□□□ 0.31
RAB40CQ96S21 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40CQ96S21 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB40CQ96S21 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RAB40CQ96S21 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB40CQ96S21 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 MIR4787-201ENST00000607364 84 ntBASIC16.98■□□□□ 0.31
RAB40CQ96S21 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB40CQ96S21 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RAB40CQ96S21 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RAB40CQ96S21 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RAB40CQ96S21 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB40CQ96S21 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40CQ96S21 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 AC010141.3-201ENST00000456659 717 ntBASIC16.97■□□□□ 0.31
RAB40CQ96S21 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms