Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP6Q96FZ7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP6Q96FZ7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 AC079089.2-201ENST00000531211 1277 ntBASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP6Q96FZ7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHMP6Q96FZ7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP6Q96FZ7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP6Q96FZ7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP6Q96FZ7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP6Q96FZ7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 AC021242.3-201ENST00000607598 1377 ntBASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP6Q96FZ7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms