Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM11Q96F44 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TRIM11Q96F44 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM11Q96F44 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM11Q96F44 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM11Q96F44 TPRG1LP1-201ENST00000598702 760 ntBASIC22.21■■□□□ 1.15
TRIM11Q96F44 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.21■■□□□ 1.15
TRIM11Q96F44 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM11Q96F44 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM11Q96F44 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM11Q96F44 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM11Q96F44 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
TRIM11Q96F44 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TRIM11Q96F44 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.2■■□□□ 1.14
TRIM11Q96F44 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM11Q96F44 AC053503.5-201ENST00000601508 636 ntBASIC22.2■■□□□ 1.14
TRIM11Q96F44 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM11Q96F44 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM11Q96F44 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM11Q96F44 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM11Q96F44 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TRIM11Q96F44 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM11Q96F44 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM11Q96F44 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM11Q96F44 EEF1DP3-203ENST00000566025 782 ntBASIC22.19■■□□□ 1.14
TRIM11Q96F44 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM11Q96F44 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM11Q96F44 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM11Q96F44 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.18■■□□□ 1.14
TRIM11Q96F44 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TRIM11Q96F44 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.18■■□□□ 1.14
TRIM11Q96F44 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.18■■□□□ 1.14
TRIM11Q96F44 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM11Q96F44 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM11Q96F44 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM11Q96F44 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM11Q96F44 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM11Q96F44 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM11Q96F44 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 AC005837.3-201ENST00000612163 286 ntBASIC22.17■■□□□ 1.14
TRIM11Q96F44 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM11Q96F44 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
TRIM11Q96F44 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM11Q96F44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM11Q96F44 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM11Q96F44 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRIM11Q96F44 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TRIM11Q96F44 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM11Q96F44 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TRIM11Q96F44 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM11Q96F44 IRS3P-201ENST00000223076 1006 ntBASIC22.15■■□□□ 1.14
TRIM11Q96F44 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
TRIM11Q96F44 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
TRIM11Q96F44 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 382.7 ms