Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF31Q96EP0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF31Q96EP0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 AL121832.2-201ENST00000610979 668 ntBASIC20.2■□□□□ 0.82
RNF31Q96EP0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF31Q96EP0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF31Q96EP0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 GUSBP6-202ENST00000438529 1198 ntBASIC20.19■□□□□ 0.82
RNF31Q96EP0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 AC010536.3-201ENST00000620306 533 ntBASIC20.19■□□□□ 0.82
RNF31Q96EP0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 AC007375.3-201ENST00000600936 2314 ntBASIC20.19■□□□□ 0.82
RNF31Q96EP0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF31Q96EP0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF31Q96EP0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF31Q96EP0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF31Q96EP0 AC138907.5-202ENST00000569484 235 ntBASIC20.18■□□□□ 0.82
RNF31Q96EP0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 AC231657.2-201ENST00000624556 255 ntBASIC20.18■□□□□ 0.82
RNF31Q96EP0 SLC25A24-204ENST00000569674 2357 ntBASIC20.18■□□□□ 0.82
RNF31Q96EP0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF31Q96EP0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF31Q96EP0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 TSPY6P-201ENST00000448518 926 ntBASIC20.17■□□□□ 0.82
RNF31Q96EP0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 AC105036.2-201ENST00000569468 176 ntBASIC20.17■□□□□ 0.82
RNF31Q96EP0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF31Q96EP0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RNF31Q96EP0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms