Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 AC061975.6-201ENST00000579045 1553 ntBASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 CLDN5-201ENST00000403084 2357 ntBASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 MIR663A-201ENST00000385250 93 ntBASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PSPC1Q8WXF1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PSPC1Q8WXF1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 CNN2P6-201ENST00000439038 900 ntBASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 TERF1P5-201ENST00000477545 1207 ntBASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSPC1Q8WXF1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 AC013268.1-206ENST00000638368 961 ntBASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 AC112229.1-201ENST00000639295 961 ntBASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSPC1Q8WXF1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 HLA-L-209ENST00000420110 1011 ntBASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 AC005181.1-201ENST00000604782 1256 ntBASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSPC1Q8WXF1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSPC1Q8WXF1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms