Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CKAP2Q8WWK9 AC133637.1-201ENST00000624115 1537 ntBASIC20.89■□□□□ 0.94
CKAP2Q8WWK9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
CKAP2Q8WWK9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CKAP2Q8WWK9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CKAP2Q8WWK9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 AC068587.7-201ENST00000641602 218 ntBASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.89■□□□□ 0.93
CKAP2Q8WWK9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 Z92544.1-202ENST00000571933 1220 ntBASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.88■□□□□ 0.93
CKAP2Q8WWK9 AL162377.1-201ENST00000618844 1793 ntBASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.87■□□□□ 0.93
CKAP2Q8WWK9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 AC007225.1-201ENST00000566331 1836 ntBASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 AL034346.1-201ENST00000568244 1277 ntBASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.86■□□□□ 0.93
CKAP2Q8WWK9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 AC112907.3-201ENST00000577781 2400 ntBASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 AC087289.5-201ENST00000586076 3175 ntBASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CKAP2Q8WWK9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms