Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMIM11BQ8TCY0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
SMIM11BQ8TCY0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SMIM11BQ8TCY0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11BQ8TCY0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 HYI-210ENST00000486909 905 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11BQ8TCY0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 SMG8-203ENST00000578922 2178 ntBASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 THA1P-201ENST00000590384 1145 ntBASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 AC019171.1-201ENST00000601251 1056 ntBASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11BQ8TCY0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 AC018445.3-201ENST00000624177 1945 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms